1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtgccgtctctcatttttcctgctccatgaccatgattatttatatttattgatctctacttgccatgacatttttgttttttgcttcataatacttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAATAAAACCACCGATGTGCTTTTCGAAGGACGATGCAG
species | Zea mays |
transcript | GRMZM2G124353_T01 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: GAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|6540601|gb|AW225263.1|AW225263
genomic: GAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|6194732|gb|AW146836.1|AW146836
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGTCAGAAACCATTGNNNNNNNNGAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|31910695|gb|CD651553.1|CD651553
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|5123999|gb|AI745840.1|AI745840
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|60350662|gb|DN217635.1|DN217635
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|30031576|gb|CB833427.1|CB833427
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|148955021|gb|EC900524.2|EC900524
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGTTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTTTGCATGGTAACGTTTTCAGAAEST: gi|60338215|gb|DN205188.1|DN205188
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGATCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|60349531|gb|DN216504.1|DN216504
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|211311886|gb|FK975957.1|FK975957
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|60398309|gb|DN231125.1|DN231125
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|5871627|gb|AW018098.1|AW018098
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGGGTCCTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|211061643|gb|FL451762.1|FL451762
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: TCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATCGTAACGTCTTCAGAAEST: gi|8318607|gb|BE025352.1|BE025352
genomic: TCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGACAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGAGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|44900211|gb|CK826756.1|CK826756
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG TTCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|211311888|gb|FK975959.1|FK975959
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|67014041|gb|CO442790.1|CO442790
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: TAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|13562273|gb|BG550493.1|BG550493
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|113701983|gb|EE679487.1|EE679487
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|78025401|gb|DV493788.1|DV493788
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|60356418|gb|DN223391.1|DN223391
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|6564029|gb|AW231651.1|AW231651
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|4776049|gb|AI665052.1|AI665052
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|148931506|gb|EC874539.2|EC874539
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|5439282|gb|AI820203.1|AI820203
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|37390746|gb|CF632607.1|CF632607
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAAEST: gi|37399847|gb|CF637263.1|CF637263
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
EST: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAG ATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
genomic: GAAGACCCCTGCCAAGTCAGAAACCATTGAACTGTTTGAGAAGCTCAGAGgtgccgtctc ... ttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAA
tgatctctacttgccatgacatttttgttttttgcttcataatacttgttaacagATCTCGGGGTACTAGTTGGAAAGGGCGGTCTGCATGGTAACGTCTTCAGAATAAAACCACCGATGTGCTTTTCGAAGGACGATGCAG
tattgat putative branch site (score: 356)
acatttttgtttttt TA-rich tract