1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtaaattttgttttgcctttggcttatatatttattgcttatttcattctgcaatttactccctcatgcaccttttggaccctttcagatattttcatattgttgtatttgtttcatatgcattcctcagctctagtattatttgacaaaaccgtaaactgatgccatgctgtttaaatgtttgtgtagGATTGGTCTGGTCAAAGCCCTGGAAGCGTCATTTCTGAAATTTGTGGCTTGGTTGTGGTGTTGTCTGGTACCATTTTGTTGCATGTGACGAAGGATTATG
species | Zea mays |
transcript | GRMZM2G120175_T04 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: ATGTAATGTTCACAACTCTTACAATACTTGCCAGCGTCATAATGTTCAAG GATTGGTCTGGTCAAAGCCCTGGAAGCGTCATTTCTGAAATTTGTGGCTTGEST: gi|60354097|gb|DN221070.1|DN221070
genomic: ATGTAATGTTCACAACTCTTACAATACTTGCCAGCGTCATAATGTTCAAGgtaaattttg ... gtttgtgtagGATTGGTCTGGTCAAAGCCCTGGAAGCGTCATTTCTGAAATTTGTGGCTTG
EST: ATGTAATGTTCACAACTCTTACAATACTTGCCAGCGTCATAATGTTCAAG GATTGGTCTGGTCAAAGCCCTGGAAGCGTCATTTCTGAAATTTGTGGCTTGEST: gi|78120401|gb|DV538785.1|DV538785
genomic: ATGTAATGTTCACAACTCTTACAATACTTGCCAGCGTCATAATGTTCAAGgtaaattttg ... gtttgtgtagGATTGGTCTGGTCAAAGCCCTGGAAGCGTCATTTCTGAAATTTGTGGCTTG
EST: ATGTAATGTTCACAACTCTTACAATACTTGCCAGCGTCATAATGTTCAAG GATTGGTCTGGTCAAAGCCCTGGAAGCGTCATTTCTGAAATTTGTGGCTTGEST: gi|148934735|gb|EC878784.2|EC878784
genomic: ATGTAATGTTCACAACTCTTACAATACTTGCCAGCGTCATAATGTTCAAGgtaaattttg ... gtttgtgtagGATTGGTCTGGTCAAAGCCCTGGAAGCGTCATTTCTGAAATTTGTGGCTTG
EST: ATGTAATGTTCACAACTCTTACAATACTTGCCAGCGTCATAATGTTCAAG GATTGGTCTGGTCAAAGCCCTGGAAGCGTCATTTCTGAAATTTGTGGCTTGEST: gi|74234882|gb|DT642796.1|DT642796
genomic: ATGTAATGTTCACAACTCTTACAATACTTGCCAGCGTCATAATGTTCAAGgtaaattttg ... gtttgtgtagGATTGGTCTGGTCAAAGCCCTGGAAGCGTCATTTCTGAAATTTGTGGCTTG
EST: ATGTAATGTTCACAACTCTTACAATACTTGCCAGCGTCATAATGTTCAAG GATTGGTCTGGTCAAAGCCCTGGAAGCGTCATTTCTGAAATTTGTGGCTTGEST: gi|148943740|gb|EC888810.2|EC888810
genomic: ATGTAATGTTCACAACTCTTACAATACTTGCCAGCGTCATAATGTTCAAGgtaaattttg ... gtttgtgtagGATTGGTCTGGTCAAAGCCCTGGAAGCGTCATTTCTGAAATTTGTGGCTTG
EST: ATGTAATGTTCACAACTCTTACAATACTTGCCAGCGTCATAATGTTCAAG GATTGGTCTGGTCAAAGCCCTGGAAGCGTCATTTCTGAAATTTGTGGCTTGEST: gi|149085220|gb|EE174728.2|EE174728
genomic: ATGTAATGTTCACAACTCTTACAATACTTGCCAGCGTCATAATGTTCAAGgtaaattttg ... gtttgtgtagGATTGGTCTGGTCAAAGCCCTGGAAGCGTCATTTCTGAAATTTGTGGCTTG
EST: ATGTAATGTTCACAACTCTTACAATACTTGCCAGCGTCATAATGTTCAAG GATTGGTCTGGTCAAAGCCCTGGAAGCGTCATTTCTGAAATTTGTGGCTTGEST: gi|76287457|gb|DV027025.1|DV027025
genomic: ATGTAATGTTCACAACTCTTACAATACTTGCCAGCGTCATAATGTTCAAGgtaaattttg ... gtttgtgtagGATTGGTCTGGTCAAAGCCCTGGAAGCGTCATTTCTGAAATTTGTGGCTTG
EST: ATGTAATGTTCACAACTCTTACAATACTTGCCAGCGTCATAATGTTCAAG GATTGGTCTGGTCAAAGCCCTGGAAGCGTCATTTCTGAAATTTGTGGCTTGEST: gi|211152612|gb|FL453073.1|FL453073
genomic: ATGTAATGTTCACAACTCTTACAATACTTGCCAGCGTCATAATGTTCAAGgtaaattttg ... gtttgtgtagGATTGGTCTGGTCAAAGCCCTGGAAGCGTCATTTCTGAAATTTGTGGCTTG
EST: TGCCAGCGTCATAATGTTCAAG GATTGGTCTGGTCAAAGCCCTGGAAGCGTCATTTCTGAAATTTGTGGCTTGEST: gi|166680559|gb|EG262871.1|EG262871
genomic: TGCCAGCGTCATAATGTTCAAGgtaaattttg ... gtttgtgtagGATTGGTCTGGTCAAAGCCCTGGAAGCGTCATTTCTGAAATTTGTGGCTTG
EST: ATGTAATGTTCACAACTCTTACAATACTTGCCAGCGTCATAATGTTCAAG GATTGGTCTGGTCAAAG
genomic: ATGTAATGTTCACAACTCTTACAATACTTGCCAGCGTCATAATGTTCAAGgtaaattttg ... gtttgtgtagGATTGGTCTGGTCAAAG
agtattatttgacaaaaccgtaaactgatgccatgctgtttaaatgtttgtgtagGATTGGTCTGGTCAAAGCCCTGGAAGCGTCATTTCTGAAATTTGTGGCTTGGTTGTGGTGTTGTCTGGTACCATTTTGTTGCATGTGACGAAGGATTATG
aactgat putative branch site (score: 86)
tttaaatgttt TA-rich tract