1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtcagcagcattggctagaccgcatccccgccaatccatataagctttattttgtttttttttttcttcagcgctgatgctaccatttgagtttgacgacggtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGACTACCCCCGCGACCCGAGCGAGTACGTGCGGCGCGTCGGGCGGACTGCC
species | Zea mays |
transcript | GRMZM2G113267_T01 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAG GGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGAEST: gi|71308808|gb|DR790647.1|DR790647
genomic: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAGgtcagcagca ... gtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
EST: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAG GGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGAEST: gi|76920136|gb|DV168027.1|DV168027
genomic: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAGgtcagcagca ... gtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
EST: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAG GGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGAEST: gi|71444583|gb|DR825633.1|DR825633
genomic: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAGgtcagcagca ... gtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
EST: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAG GGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGAEST: gi|149111889|gb|EE191046.2|EE191046
genomic: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAGgtcagcagca ... gtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
EST: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAG GGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGAEST: gi|149086256|gb|EE175797.2|EE175797
genomic: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAGgtcagcagca ... gtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
EST: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAG GGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGAEST: gi|149082649|gb|EE171854.2|EE171854
genomic: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAGgtcagcagca ... gtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
EST: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAG GGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTTTTCGAEST: gi|78026219|gb|DV494606.1|DV494606
genomic: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAGgtcagcagca ... gtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
EST: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAG GGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTTTTCGAEST: gi|31357346|gb|CD441703.1|CD441703
genomic: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAGgtcagcagca ... gtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
EST: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAG GGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGAEST: gi|149083804|gb|EE173175.2|EE173175
genomic: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAGgtcagcagca ... gtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
EST: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAG GGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTTTTCGAEST: gi|12969960|gb|BG266744.1|BG266744
genomic: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAGgtcagcagca ... gtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
EST: TCCATGTTCCTTGTGTGCACAGATAG GGCGTCGCGGGGCATCGGCTTTGCGAACGTGAACCACGTGGTGCTCTTCGGEST: gi|149027555|gb|EE046565.2|EE046565
genomic: TCCATGTTCCTTGTGTGCACAGATAGgtcagcagca ... gtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
EST: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAG GGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGAEST: gi|211220791|gb|FL456553.1|FL456553
genomic: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAGgtcagcagca ... gtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
EST: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAG GGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGAEST: gi|32840583|gb|CD980264.1|CD980264
genomic: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAGgtcagcagca ... gtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
EST: TTTCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAG GGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGAEST: gi|110487925|gb|EE012484.1|EE012484
genomic: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAGgtcagcagca ... gtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
EST: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAG GGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGAEST: gi|71317553|gb|DR795508.1|DR795508
genomic: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAGgtcagcagca ... gtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
EST: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAG GGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGAEST: gi|76914390|gb|DV165509.1|DV165509
genomic: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAGgtcagcagca ... gtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
EST: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAG GGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGAEST: gi|4753537|gb|AI657447.1|AI657447
genomic: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAGgtcagcagca ... gtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
EST: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAG GGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGAEST: gi|76285737|gb|DV025305.1|DV025305
genomic: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAGgtcagcagca ... gtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
EST: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAG GGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGAEST: gi|71444660|gb|DR825710.1|DR825710
genomic: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAGgtcagcagca ... gtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
EST: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAG GGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTTTTCGAEST: gi|78109607|gb|DV528023.1|DV528023
genomic: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAGgtcagcagca ... gtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
EST: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAG GGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGAEST: gi|71444661|gb|DR825711.1|DR825711
genomic: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAGgtcagcagca ... gtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
EST: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAG GGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGAEST: gi|76914388|gb|DV165508.1|DV165508
genomic: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAGgtcagcagca ... gtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
EST: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAG GGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
genomic: TTCCTGAACAAGCAAACGGCTGACTCCATGTTCCTTGTGTGCACAGATAGgtcagcagca ... gtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGA
tttttttttcttcagcgctgatgctaccatttgagtttgacgacggtcggtgcagGGCGTCGCGGGGCATCGACTTTGCGAACGTGAACCACGTGGTGCTCTTCGACTACCCCCGCGACCCGAGCGAGTACGTGCGGCGCGTCGGGCGGACTGCC
gtttgac putative branch site (score: 24)
ttttctt TA-rich tract