1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtatgtatgcacccagctttgttatttgagcatatttatatattggactgctctgttggaacgaattttctacactctgaacttctgaagcatacagaatattttgtatatccatttgacaattatgttctgattgatagATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAAAATTATATACCACCACCAGCACCACCATCTTATGATGAAATTAATGGAG
species | Zea mays |
transcript | GRMZM2G104166_T02 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: GAACTTACCATCAGAGAGTTCTGGAGATACTTGACAAATTGGAAGAATAA ATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAAEST: gi|67017186|gb|CO445935.1|CO445935
genomic: GAACTTACCATCAGAGAGTTCTGGAGATACTTGACAAATTGGAAGAAGAAgtatgtatgc ... tgattgatagATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAA
EST: GAACTTACCATCAGAGAGTTCTGGAGATACTTGACAAATTGGAAGAAGAA ATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAAEST: gi|78543553|gb|DV621051.1|DV621051
genomic: GAACTTACCATCAGAGAGTTCTGGAGATACTTGACAAATTGGAAGAAGAAgtatgtatgc ... tgattgatagATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAA
EST: GAACTTACCATCAGAGAGTTCTGGAGATACTTGACAAATTGGAAGAAGAA ATGGTGTCTGAGCGCCNNNNNNNTTGAAGCACCCCCGACTCCAGCAGCTGAEST: gi|76283089|gb|DV022657.1|DV022657
genomic: GAACTTACCATCAGAGAGTTCTGGAGATACTTGACAAATTGGAAGAAGAAgtatgtatgc ... tgattgatagATGGTGTCTGAGCGCC-AAAAAATTGAAGCACCCCCGACTCCAGCAGCTGA
EST: GAACTTACCATCAGAGAGTTCTGGAGATACTTGACAAATTGGAAGAAGAA ATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAAEST: gi|6095746|gb|AW120413.1|AW120413
genomic: GAACTTACCATCAGAGAGTTCTGGAGATACTTGACAAATTGGAAGAAGAAgtatgtatgc ... tgattgatagATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAA
EST: AACTTACCATCAGAGAGTTCTGGAGAATACTTGACAAATTGGAAGAAGAA ATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAAEST: gi|211163116|gb|FL067005.1|FL067005
genomic: AACTTACCATCAGAGAGTTCTGGAG-ATACTTGACAAATTGGAAGAAGAAgtatgtatgc ... tgattgatagATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAA
EST: GAACTTACCATCAGAGAGTTCTGGAGATACTTGACAAATTGGAAGAAGAA ATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAAEST: gi|211163114|gb|FL067003.1|FL067003
genomic: GAACTTACCATCAGAGAGTTCTGGAGATACTTGACAAATTGGAAGAAGAAgtatgtatgc ... tgattgatagATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAA
EST: GAACTTACCATCAGAGAGTTCTGGAGATACTTGACAAATTGGAAGAAGAA ATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAAEST: gi|5895761|gb|AW037007.1|AW037007
genomic: GAACTTACCATCAGAGAGTTCTGGAGATACTTGACAAATTGGAAGAAGAAgtatgtatgc ... tgattgatagATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAA
EST: GAACTTACCATCAGAGAGTTCTGGAGATACTTGACAAATTGGAAGAAGAA ATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAAEST: gi|91053809|gb|EB164227.1|EB164227
genomic: GAACTTACCATCAGAGAGTTCTGGAGATACTTGACAAATTGGAAGAAGAAgtatgtatgc ... tgattgatagATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAA
EST: GGAGATACTTGACAAATTGGAAGAAGAA ATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAAEST: gi|26456480|gb|CA828063.1|CA828063
genomic: GGAGATACTTGACAAATTGGAAGAAGAAgtatgtatgc ... tgattgatagATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAA
EST: GAACTTACCATCAGAGAGTTCTGGAGATACTTGACAAATTGGAAGAAGAA ATGGTGTCTGAGCGCCEST: gi|91056506|gb|EB166924.1|EB166924
genomic: GAACTTACCATCAGAGAGTTCTGGAGATACTTGACAAATTGGAAGAAGAAgtatgtatgc ... tgattgatagATGGTGTCTGAGCGCC
EST: GAACTTACCATCAGAGAGTTCTGGAGATACTTGACAAATTGGAAGAAGAA ATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAAEST: gi|5847057|gb|AW000136.1|AW000136
genomic: GAACTTACCATCAGAGAGTTCTGGAGATACTTGACAAATTGGAAGAAGAAgtatgtatgc ... tgattgatagATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAA
EST: GAACTTACCATCAGAGAGTTCTGGAGATACTTGACAAATTGGAAGAAGAA ATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAAEST: gi|148996412|gb|EE035707.2|EE035707
genomic: GAACTTACCATCAGAGAGTTCTGGAGATACTTGACAAATTGGAAGAAGAAgtatgtatgc ... tgattgatagATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAA
EST: GAACTTACCATCAGAGAGTTCTGGAGATACTTGACAAATTGGAAGAAGAA ATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAA
genomic: GAACTTACCATCAGAGAGTTCTGGAGATACTTGACAAATTGGAAGAAGAAgtatgtatgc ... tgattgatagATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAA
tgaagcatacagaatattttgtatatccatttgacaattatgttctgattgatagATGGTGTCTGAGCGCCAAAAAATTGAAGCACCCCCGACTCCAGCAGCTGAAAATTATATACCACCACCAGCACCACCATCTTATGATGAAATTAATGGAG
ttctgat putative branch site (score: 3)
agaatattttgtatat TA-rich tract