Sequence
atgc intronic sequence ATGC exonic sequence...ttatttctcagaaaagtaatatattgtctgataattctctctatgtgtagagtttttatgtcaatgtattatcgagtgcacaatctgtttcaaaatgcagAGCTCATGGACAAAGCGTGCTGTGGAGATTGACAGCCCACAACCTATATCTCCCGATCAACTAGTTGATCCACCTGATAGTACATGTGCACAAGTAATTC
Basic information
Orthologous splice sites
atgc intronic sequence ATGC exonic sequence
upper sequence: GRMZM2G095727_T03 (Zea mays), 3'ss of exon 7
lower sequence: LOC_Os03g17570.1 (Oryza sativa), 3'ss of exon 7
ttat-ttctcagaaaagtaatatattgtctgataattctctctatgtgtagagtttttatgtcaatgtattatcgagtgcacaatctgtttcaaaatgcagAGCTCATGGACAAAGCGTGCTGTGGAGATTGACAGCCCACAACCTATATCTCCCGATCAACTAGTTGATCCACCTGATAGTACATGTGCACAAGTAATTC
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-aatgttgtaaatgaaaaaacaacttcgcgaacagttttctctaaatgtaggacaattgtgccaatgtattctcatgccatcagcctgttttaaaacacagAGTTCATGGACAAAGCGTGCAGTGGAGATTGACAGCCCACAACAAATGTCTCCTGATCAACCATCCGATCTACCAGATAGTACTTGTGCGCAAGTAATTCMapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|5268666|gb|AI770630.1|AI770630EST: CAATGCTAGGGATGGAAGTGACAATGGCAGTGGTACTCAA AGCTCATGGACAAAGCGTGCTGTGGAGATTGACAGCCCACAACCTATATCT
genomic: CAATGCTAGGGATGGAAGTGACAATGGCAGTGGTACTCAAgtatgtgtcc ... caaaatgcagAGCTCATGGACAAAGCGTGCTGTGGAGATTGACAGCCCACAACCTATATCT
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.tgtagagtttttatgtcaatgtattatcgagtgcacaatctgtttcaaaatgcagAGCTCATGGACAAAGCGTGCTGTGGAGATTGACAGCCCACAACCTATATCTCCCGATCAACTAGTTGATCCACCTGATAGTACATGTGCACAAGTAATTC
tctgtttc CT-rich tract
aatgtattat TA-rich tract