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gttcactttcattgttctagcgagtagcttcagcgtttgtaaaagactggaattctatcattaataatttgatattgttgattaacagGTGAGGTCTGTTGTGCTGAATACCCTAAACAGGGCAAGGTTTACCGTCGCAGTGGATTCCTTCATTAAAACTG
species | Zea mays |
transcript | GRMZM2G081188_T02 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: CTTCGTTTGCCTTCCTTTCCTGTGGATATCTCCTGAGTTCATATCAAGAG GTGAGGTCTGTTGTGCTGAATACCCTAAACAGGGCAAGGTTTACCGTCGCAEST: gi|211421799|gb|FL427212.1|FL427212
genomic: CTTCGTTTGCCTTCCTTTCCTGTGGATATCTCCTGAGTTCATATCAAGAGgttcactttc ... tgattaacagGTGAGGTCTGTTGTGCTGAATACCCTAAACAGGGCAAGGTTTACCGTCGCA
EST: CTTCGTTTGCCTTCCTTTCCTGTGGATATCTCCTGAGTTCATATCAAGAG GTGAGGTCTGTTGTGCTGAATACCCTAAACAGGGCAAGGTTTACCGTCGCAEST: gi|31353527|gb|CD437884.1|CD437884
genomic: CTTCGTTTGCCTTCCTTTCCTGTGGATATCTCCTGAGTTCATATCAAGAGgttcactttc ... tgattaacagGTGAGGTCTGTTGTGCTGAATACCCTAAACAGGGCAAGGTTTACCGTCGCA
EST: CTTCGTTTGCCTTCCTTTCCTGTGGATATCTCCTGAGTTCATATCAAGAG GTGAGGTCTGTTGTGCTGAATACCCTAAACAGGGCAAGGTTTACCGTCGCAEST: gi|32826967|gb|CD966645.1|CD966645
genomic: CTTCGTTTGCCTTCCTTTCCTGTGGATATCTCCTGAGTTCATATCAAGAGgttcactttc ... tgattaacagGTGAGGTCTGTTGTGCTGAATACCCTAAACAGGGCAAGGTTTACCGTCGCA
EST: CTTCGTTTGCCTTCCTTTCCTGTGGATATCTCCTGAGTTCATATCAAGAG GTGAGGTCTGTTGTGCTGAATACCCTAAACAGGGCAAGGTTTACCGTCGCAEST: gi|32930803|gb|CF035615.1|CF035615
genomic: CTTCGTTTGCCTTCCTTTCCTGTGGATATCTCCTGAGTTCATATCAAGAGgttcactttc ... tgattaacagGTGAGGTCTGTTGTGCTGAATACCCTAAACAGGGCAAGGTTTACCGTCGCA
EST: CTTCGTTTGCCTTCCTTTCCTGTGGATATCTCCTGAGTTCATATCAAGAG GTGAGGTCTGTTGTGCTGAATACCCTAAACAGGGCAAGGTTTACCGTCGCA
genomic: CTTCGTTTGCCTTCCTTTCCTGTGGATATCTCCTGAGTTCATATCAAGAGgttcactttc ... tgattaacagGTGAGGTCTGTTGTGCTGAATACCCTAAACAGGGCAAGGTTTACCGTCGCA
cgtttgtaaaagactggaattctatcattaataatttgatattgttgattaacagGTGAGGTCTGTTGTGCTGAATACCCTAAACAGGGCAAGGTTTACCGTCGCAGTGGATTCCTTCATTAAAACTG
aattctatcattaata TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gttcactttcattgttctagcgagtagcttcagcgtttgtaaaagactggaattctatcattaataatttgatattgttgattaacagGTGAGGTCTGTTGTGCTGAATACCCTAAACAGGGCAAGGTTTACCGTCGCAGTGGATTCCTTCATTAAAACTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA