1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...gctggttttttagtgccctgctttggatttaccaagttgaaaaatttgacgccatatgaaaattcaggctgaatggatcaaatggctgtttgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGCTATTGGAACTGGTAAAGTTGCCACCCCAGCTCAGGCTCAGGAA
species | Zea mays |
transcript | GRMZM2G030784_T02 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|6021111|gb|AW066039.1|AW066039
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|14569384|gb|BI097707.1|BI097707
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGEST: gi|5296085|gb|AI782960.1|AI782960
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTG
EST: GGCTGGGTCTACCATGGAGGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTEST: gi|19437215|gb|BM953625.1|BM953625
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGT
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACCAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|213178228|gb|FM191284.1|FM191284
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|7216447|gb|AW562569.1|AW562569
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGAGGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGEST: gi|71323015|gb|DR798174.1|DR798174
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|211531696|gb|FL104786.1|FL104786
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGAGGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|67026065|gb|CO454814.1|CO454814
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|67024324|gb|CO453073.1|CO453073
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|29544519|gb|CB604899.1|CB604899
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|71433477|gb|DR814527.1|DR814527
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|31355717|gb|CD440074.1|CD440074
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|211324554|gb|FL104645.1|FL104645
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|67021074|gb|CO449823.1|CO449823
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGTTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|61236882|gb|DN586594.1|DN586594
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|67034586|gb|CO463136.1|CO463136
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|21760002|gb|BQ635543.1|BQ635543
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGAGGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|211335381|gb|FL104715.1|FL104715
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GCTGGGTCTACCATGGGATGTTGT-GCTGCACAAACAAA-GCAATTGCTG AGAAAGATCA-G-ACTGGAGCAAEST: gi|211326717|gb|FL104658.1|FL104658
genomic: GCTGGGTCTACCATGG-ATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAA-GATCAAGGACTGGAGCAA
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTT-TNTGCCTATGAACCAGTTTGGEST: gi|32865187|gb|CF004869.1|CF004869
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGT-TGCCTATGAACCAGTTTGG
EST: GGCTGGGTCTAC-ATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAEST: gi|211335377|gb|FL104711.1|FL104711
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGA
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCEST: gi|32906873|gb|CF011686.1|CF011686
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGC
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGEST: gi|67016932|gb|CO445681.1|CO445681
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|84980759|gb|DW531108.1|DW531108
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|211324557|gb|FL104648.1|FL104648
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTKTNTC-CCTATGAACCAGTTTGGEST: gi|7162498|gb|AW520120.1|AW520120
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGT-TGTTGCCTATGAACCAGTTTGG
EST: GGCTGGGTCTACCATGGAGGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|38502719|gb|CF972579.1|CF972579
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|78109161|gb|DV527578.1|DV527578
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|211525697|gb|FL104760.1|FL104760
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGAGGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|7844331|gb|AW787553.1|AW787553
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGAGGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|38502545|gb|CF972405.1|CF972405
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTTTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|67012349|gb|CO441098.1|CO441098
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|21331670|gb|BQ487051.1|BQ487051
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGAGGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|211528703|gb|FL104781.1|FL104781
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGAGGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|211528308|gb|FL091444.1|FL091444
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|20208196|gb|BQ134285.1|BQ134285
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGAGGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGEST: gi|5439487|gb|AI820408.1|AI820408
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAG
EST: GGCTGGGTCTACCATGGAGGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|211405979|gb|FL414494.1|FL414494
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|18384965|gb|BM418164.1|BM418164
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGATGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|211534318|gb|FL091477.1|FL091477
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|60338733|gb|DN205706.1|DN205706
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGAGGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|211522692|gb|FL104747.1|FL104747
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: G-CTGGGTCTACCATGGAGGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGGAGCAEST: gi|29544395|gb|CB604775.1|CB604775
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGG-AGCA
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGEST: gi|211326711|gb|FL104652.1|FL104652
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAG
EST: GGCTGGGTCTACCATGGAGGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGGACTGGAGCAEST: gi|83278900|gb|DV942908.1|DV942908
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGG-ACTGGAGCA
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|8551638|gb|BE128809.1|BE128809
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGAGGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|67017841|gb|CO446590.1|CO446590
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|31350868|gb|CD435225.1|CD435225
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|31355497|gb|CD439854.1|CD439854
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|29544034|gb|CB604414.1|CB604414
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|211525700|gb|FL104763.1|FL104763
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTEST: gi|67020170|gb|CO448919.1|CO448919
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTT
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|67020068|gb|CO448817.1|CO448817
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|31354917|gb|CD439274.1|CD439274
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|18384001|gb|BM417201.1|BM417201
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|211324556|gb|FL104647.1|FL104647
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGWTTGGGEST: gi|211519681|gb|FL104735.1|FL104735
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GCTGGGTCTACCATGGAGGTTGTTGCTGCACAAACCAAAAGCA-TTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTTGCCTATGAACCCAGTTTGEST: gi|50325684|gb|CO520810.1|CO520810
genomic: GCTGGGTCTACCATGGATGTTGTTGCTGCACAAAC-AAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTT-GCCTATGAACC-AGTTTG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|7844330|gb|AW787552.1|AW787552
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGAGGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|29544188|gb|CB604568.1|CB604568
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACCAAAGCCATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|71332087|gb|DR802949.1|DR802949
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|101389975|gb|EB816919.1|EB816919
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|32908761|gb|CF013574.1|CF013574
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|93283118|gb|EB675382.1|EB675382
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|67035472|gb|CO464005.1|CO464005
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|31355762|gb|CD440119.1|CD440119
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|67024408|gb|CO453157.1|CO453157
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGEST: gi|211328888|gb|FL104673.1|FL104673
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
EST: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGAWCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTEST: gi|6021490|gb|AW066418.1|AW066418
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGT
EST: GGCTGGGTCTACCATGGAGGTTGNTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGGTGCCTATGAACCAEST: gi|166431067|gb|EG269643.1|EG269643
genomic: GGCTGGGTCTACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCA
EST: GGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
genomic: GGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacctttca ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGG
ttgacgccatatgaaaattcaggctgaatggatcaaatggctgtttgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGCTATTGGAACTGGTAAAGTTGCCACCCCAGCTCAGGCTCAGGAA
atttgac putative branch site (score: 4)
tttgtttt putative PPT
atatgaaaatt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gctggttttttagtgccctgctttggatttaccaagttgaaaaatttgacgccatatgaaaattcaggctgaatggatcaaatggctgtttgttttacagAGAAGATCAAGGACTGGAGCAACGTAGTTGTTGCCTATGAACCAGTTTGGGCTATTGGAACTGGTAAAGTTGCCACCCCAGCTCAGGCTCAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA