1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtacttttgacaacagcgtcaacgagctcaaaaatgaaaataatgccttcccccagttttcatgataatgaaaattttcagatccatttatggcattttgtttaactcagcttcctgattgttttgttgttggtgctgcagTTTTCTGACAATTTTGCTATTCTGTTATTCCACTATGATGGCCGGGTGAGTGAGTGGGATGAATTTGAGTGGTCCCAGCGAGCTATCCATATTAGTGTCA
species | Zea mays |
transcript | GRMZM5G846339_T01 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: TTACTGTTGGAGTTGAGCAGAAAGCAAATATAAACAGAGCTGTGAAGAAG TTTTCTGACAATTTTGCTATTCTGTTATTCCACTATGATGGCCGGGTGAGTEST: gi|149004827|gb|EE039332.2|EE039332
genomic: TTACTGTTGGAGTTGAGCAGAAAGCAAATATAAACAGAGCTGTGAAGAAGgtacttttga ... ggtgctgcagTTTTCTGACAATTTTGCTATTCTGTTATTCCACTATGATGGCCGGGTGAGT
EST: TTACTGTTGGAGTTGAGCAGAAAGCAAATATAAACAGAGCTGTGAAGAAG TTTTCTGACAATTTTGCTATTCTNGT-ATTCCACTATGATGGCCGGGTGAGEST: gi|76915578|gb|DV166043.1|DV166043
genomic: TTACTGTTGGAGTTGAGCAGAAAGCAAATATAAACAGAGCTGTGAAGAAGgtacttttga ... ggtgctgcagTTTTCTGACAATTTTGCTATTCT-GTTATTCCACTATGATGGCCGGGTGAG
EST: TTACTGTTGGAGTTGAGCAGAAAGCAAATATAAACAGAGCTGTGAAGAAG TTTTCTGACAATTTTGCTATTCTGTTATTCCACTATGATGGCCGGGTGAGTEST: gi|32927854|gb|CF032666.1|CF032666
genomic: TTACTGTTGGAGTTGAGCAGAAAGCAAATATAAACAGAGCTGTGAAGAAGgtacttttga ... ggtgctgcagTTTTCTGACAATTTTGCTATTCTGTTATTCCACTATGATGGCCGGGTGAGT
EST: TTACTGTTGGAGTTGAGCAGAAAGCAAATATAAACAGAGCTGTGAAGAAG TTTTCTGACAATTTTGCTATTCTGTTATTCCACTATGATGGCCGGGTGAGTEST: gi|149112888|gb|EE295684.2|EE295684
genomic: TTACTGTTGGAGTTGAGCAGAAAGCAAATATAAACAGAGCTGTGAAGAAGgtacttttga ... ggtgctgcagTTTTCTGACAATTTTGCTATTCTGTTATTCCACTATGATGGCCGGGTGAGT
EST: TTACTGTTGGAGTTGAGCAGAGAGCAAATATAAACAGAGCTGTGAAGAAG TTTTCTGACAATTTTGCTATTCTGTTATTCCACTATGATGGCCGGGTGAGTEST: gi|44682283|gb|CK787331.1|CK787331
genomic: TTACTGTTGGAGTTGAGCAGAAAGCAAATATAAACAGAGCTGTGAAGAAGgtacttttga ... ggtgctgcagTTTTCTGACAATTTTGCTATTCTGTTATTCCACTATGATGGCCGGGTGAGT
EST: TTACTGTTGGAGTTGAGCAGAAAGCAAATATAAACAGAGCTGTGAAGAAG TTTTCTGACAATTTTGCTATTCTGTTATTCCACTATGATGGCCGGGTGAGTEST: gi|149070557|gb|EE158959.2|EE158959
genomic: TTACTGTTGGAGTTGAGCAGAAAGCAAATATAAACAGAGCTGTGAAGAAGgtacttttga ... ggtgctgcagTTTTCTGACAATTTTGCTATTCTGTTATTCCACTATGATGGCCGGGTGAGT
EST: TTACTGTTGGAGTTGAGCAGAAAGCAAATATAAACAGAGCTGTGAAGAAG TTTTCTGACAATTTTGCTEST: gi|148950258|gb|EC895810.2|EC895810
genomic: TTACTGTTGGAGTTGAGCAGAAAGCAAATATAAACAGAGCTGTGAAGAAGgtacttttga ... ggtgctgcagTTTTCTGACAATTTTGCT
EST: TTACTGTTGGAGTTGAGCAGAAAGCAAATATAAACAGAGCTGTGAAGAAG TTTTCTGACAATTTTGCTATTCTGTTATTCCACTATGATGGCCGGGTGAGTEST: gi|148965790|gb|EE016673.2|EE016673
genomic: TTACTGTTGGAGTTGAGCAGAAAGCAAATATAAACAGAGCTGTGAAGAAGgtacttttga ... ggtgctgcagTTTTCTGACAATTTTGCTATTCTGTTATTCCACTATGATGGCCGGGTGAGT
EST: TTACTGTTGGAGTTGAGCAGAAAGCAAATATAAACAGAGCTGTGAAGAAG TTTTCTGACAATTTTGCTATTCT
genomic: TTACTGTTGGAGTTGAGCAGAAAGCAAATATAAACAGAGCTGTGAAGAAGgtacttttga ... ggtgctgcagTTTTCTGACAATTTTGCTATTCT
tttatggcattttgtttaactcagcttcctgattgttttgttgttggtgctgcagTTTTCTGACAATTTTGCTATTCTGTTATTCCACTATGATGGCCGGGTGAGTGAGTGGGATGAATTTGAGTGGTCCCAGCGAGCTATCCATATTAGTGTCA
tcctgat putative branch site (score: 360)
attttgtttaa TA-rich tract