1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...tagcttcaattgatgccttttagaacagattctgtagagcaactcatggatactttctgcttgttttaacaaacgcgacatcgggcgagctctgatgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG
species | Zea mays |
transcript | GRMZM2G478779_T02 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: GTGAATTGGGGTTCATCCTTGATGGCTTTCCTCGAACCATGAGACAAGCG GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGGEST: gi|19058066|gb|BM736733.1|BM736733
genomic: GTGAATTGGGGTTCATCCTTGATGGCTTTCCTCGAACCATGAGACAAGCGgtaagctaat ... tctgatgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
EST: GTGAATTGGGGTTCATCCTTGATGGCTTTCCTCGAACCATGAGACAAGCG GTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
genomic: GTGAATTGGGGTTCATCCTTGATGGCTTTCCTCGAACCATGAGACAAGCGgtaagctaat ... tctgatgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGG
atggatactttctgcttgttttaacaaacgcgacatcgggcgagctctgatgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG
ttttaacaaa TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tagcttcaattgatgccttttagaacagattctgtagagcaactcatggatactttctgcttgttttaacaaacgcgacatcgggcgagctctgatgtagGTAGAAAATGGCCGATGCCGAGGATATCCAGCCCCTCGTCTGCGACAACGGAACTGGCATGGTCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
-agcttca
- - - - - tgatgcc
- - - - - - - - - - - - - -gattctg
- - - - - - - - - - - - - - - - - - - - - - catggat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aacaaac