1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtctgactggcaaaaaaaaaaaactccagattattcagttctctctacgcaccaaattcatgatcttggcgagtttaagcgtacctgatctctgcatttcggttgtttcgcagTATCTGAAGAACATACAGATAAAAGAAATCCCCATACTGGAAAGGTTCTCCCTTTTCATCTGTGTCGCGTTGGTATGGGCGTACGCTCAGATCCTCACTT
species | Zea mays |
transcript | GRMZM2G437859_T02 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: GCGTTGAGATTGGCCTGCCAATGCTGATCCTCTTTGTCGTGCTGTCTCAG TATCTGAAGAACATACAGATAAAAGAAATCCCCATACTGGAAAGGTTCTCCEST: gi|78084450|gb|DV512843.1|DV512843
genomic: GCGTTGAGATTGGCCTGCCAATGCTGATCCTCTTTGTCGTGCTGTCTCAGgtctgactgg ... tgtttcgcagTATCTGAAGAACATACAGATAAAAGAAATCCCCATACTGGAAAGGTTCTCC
EST: GCGTTGAGATTGGCCTGCCAATGCTGATCCTCTTTGTCGTGCTGTCTCAG TATCTGAAGAACATACAGATAAAAGAAATCCCCATACTGGGAAAGGTTCTCEST: gi|76923378|gb|DV169457.1|DV169457
genomic: GCGTTGAGATTGGCCTGCCAATGCTGATCCTCTTTGTCGTGCTGTCTCAGgtctgactgg ... tgtttcgcagTATCTGAAGAACATACAGATAAAAGAAATCCCCATACTGG-AAAGGTTCTC
EST: GCGTTGAGATTGGCCTGCCAATGCTGATCCTCTTTGTCGTGCTGTCTCAG TATCTGAAGAACATACAGATAAAAGAAATCCCCATACTGGAAAGGTTCTCCEST: gi|74238882|gb|DT646796.1|DT646796
genomic: GCGTTGAGATTGGCCTGCCAATGCTGATCCTCTTTGTCGTGCTGTCTCAGgtctgactgg ... tgtttcgcagTATCTGAAGAACATACAGATAAAAGAAATCCCCATACTGGAAAGGTTCTCC
EST: GCGTTGAGATTGGCCTGCCAATGCTGATCCTCTTTGTCGTGCTGTCTCAG TATCTGAAGAACATACAGATAAAAGAAATCCCCATACTGGAAAGGGTTCTCEST: gi|5055765|gb|AI734652.1|AI734652
genomic: GCGTTGAGATTGGCCTGCCAATGCTGATCCTCTTTGTCGTGCTGTCTCAGgtctgactgg ... tgtttcgcagTATCTGAAGAACATACAGATAAAAGAAATCCCCATACTGGAAAGG-TTCTC
EST: GCGTTGAGATTGGCCTGCCAATGCTGATCCTCTTTGTCGTGCTGTCTCAG TATCTGAAGAACATACAGATAAAAGAAATCCCCATACTGGAAAGGTTCTCCEST: gi|71310987|gb|DR791795.1|DR791795
genomic: GCGTTGAGATTGGCCTGCCAATGCTGATCCTCTTTGTCGTGCTGTCTCAGgtctgactgg ... tgtttcgcagTATCTGAAGAACATACAGATAAAAGAAATCCCCATACTGGAAAGGTTCTCC
EST: GCGTTGAGATTGGCCTGCCAATGCTGATCCTCTTTGTCGTGCTGTCTCAG TATCTGAAGAACATACAGATAAAAGAAATCCCCATACTGGAAAGGTTCTCCEST: gi|71438783|gb|DR819833.1|DR819833
genomic: GCGTTGAGATTGGCCTGCCAATGCTGATCCTCTTTGTCGTGCTGTCTCAGgtctgactgg ... tgtttcgcagTATCTGAAGAACATACAGATAAAAGAAATCCCCATACTGGAAAGGTTCTCC
EST: GCGTTGAGATTGGCCTGCCAATGCTGATCCTCTTTGTCGTGCTGTCTCAG TATCTGAAGAACATACAGATAAAAGAAATCCCCATACTGGAAAGGTTCTCC
genomic: GCGTTGAGATTGGCCTGCCAATGCTGATCCTCTTTGTCGTGCTGTCTCAGgtctgactgg ... tgtttcgcagTATCTGAAGAACATACAGATAAAAGAAATCCCCATACTGGAAAGGTTCTCC
catgatcttggcgagtttaagcgtacctgatctctgcatttcggttgtttcgcagTATCTGAAGAACATACAGATAAAAGAAATCCCCATACTGGAAAGGTTCTCCCTTTTCATCTGTGTCGCGTTGGTATGGGCGTACGCTCAGATCCTCACTT
acctgat putative branch site (score: 4)
ttgtttc putative PPT
agtttaa TA-rich tract