1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaagtaatttctggttcaagcacgctgctctacaatgctcatggtgaagtgcatgttgtggagagtagtaggttttagaagtattgattgattagcggcattaaatcaatgagtccatctttaaagtttgtaatcatgtactctgattttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAACTGGGATATCCACCATTGATGTGATGAACTCCATTGCTCGTGGGCAAAA
species | Zea mays |
transcript | GRMZM2G181151_T03 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|211464055|gb|FL062026.1|FL062026
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|32919410|gb|CF024222.1|CF024222
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|211464049|gb|FL062020.1|FL062020
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|33102006|gb|CF061966.1|CF061966
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|211045587|gb|FL062119.1|FL062119
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|31664290|gb|CD573015.1|CD573015
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAEST: gi|211474170|gb|FL062078.1|FL062078
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCA
EST: TATTGACAATGGCCCCC-GATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|32908718|gb|CF013531.1|CF013531
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|33100953|gb|CF060913.1|CF060913
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|211223693|gb|FL399500.1|FL399500
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|32945519|gb|CF050338.1|CF050338
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|211279000|gb|FL407011.1|FL407011
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|211469118|gb|FL062056.1|FL062056
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGGGCCAAAEST: gi|31360502|gb|CD444859.1|CD444859
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: ATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|32933270|gb|CF038082.1|CF038082
genomic: ATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|211476688|gb|FL062089.1|FL062089
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|67028686|gb|CO457435.1|CO457435
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|211466586|gb|FL062037.1|FL062037
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|32944897|gb|CF049716.1|CF049716
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: ATTGACAATGGNNNNNNNGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|211471640|gb|FL062065.1|FL062065
genomic: ATTGACAATGG-CCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAG-TGATCCAAAEST: gi|211332062|gb|FL381794.1|FL381794
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GGAGTTCTATTA-TCCCCAGTGAGAGAACCTATTCAGAGGAGATGATCCAAEST: gi|211461534|gb|FL062016.1|FL062016
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCC-AGTGAGAGAACCTATCCAGAGGAGATGATCCAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|32846162|gb|CD985843.1|CD985843
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|211045584|gb|FL062116.1|FL062116
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|211132918|gb|FL391883.1|FL391883
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCCAAEST: gi|32933397|gb|CF038209.1|CF038209
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|9953932|gb|BE640515.1|BE640515
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGGCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|33100729|gb|CF060689.1|CF060689
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|211172669|gb|FL375066.1|FL375066
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAAGT-CTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGANTC-AEST: gi|211464053|gb|FL062024.1|FL062024
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAA-GTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGA-TCCA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|211439866|gb|FL422480.1|FL422480
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCEST: gi|32942779|gb|CF047598.1|CF047598
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCC
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|211427007|gb|FL427232.1|FL427232
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|13389395|gb|BG462701.1|BG462701
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCGCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|211332674|gb|FL416300.1|FL416300
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|211466587|gb|FL062038.1|FL062038
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAEST: gi|32931129|gb|CF035941.1|CF035941
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|211466593|gb|FL062044.1|FL062044
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAAEST: gi|211448189|gb|FL410292.1|FL410292
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTG GAAAGT-CTATTAATCCCA
genomic: TATTGACAATGGCCCCCCGATATTACCTGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgttgcagGAA-GTTCTATTAATCCCA
aaatcaatgagtccatctttaaagtttgtaatcatgtactctgattttgttgcagGAAGTTCTATTAATCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAACTGGGATATCCACCATTGATGTGATGAACTCCATTGCTCGTGGGCAAAA
ctctgat putative branch site (score: 4)
ttttgtt CT-rich tract
tttaaagtttgtaat TA-rich tract