Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   		13  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagttctttcttccggcaatagtaatccatcctttcttcttcgcaagccaatcctttccttggcgtacgtaaacagGTACAGAGTATTCGGTGACCCTCCATCCCAGCGTTCTGCTGAGGACATTGCATTCGCCGTGGCGCGCTTCTTCTCCGTGGGCGGAACCTTGGCAAACTAT

Basic information

species Zea mays
transcript GRMZM2G175779_T02
intron # 6
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|37425705|gb|CF650599.1|CF650599
EST:     CCAACGAACAAGAGCATGCCGCTCTTGTGGACTGAGAACTGGACAGCACA                         GTACAGAGTATTCGGTGACCCTCCATCCCAGCGTTCTGCTGAGGACATTGC
genomic: CCAACGAACAAGAGCATGCCGCTCTTGTGGACTGAGAACTGGACAGCACAgtgagttctt ... acgtaaacagGTACAGAGTATTCGGTGACCCTCCATCCCAGCGTTCTGCTGAGGACATTGC
EST: gi|74240255|gb|DT648169.1|DT648169
EST:     CCAACGAACAAGAGCATGCCGCTCTTGTGGACTGAGAACTGGACAGCACA                         GTACAGAGTATTCGGTGACCCTCCATCCCAGCGTTCTGCTGAGGACATTTG
genomic: CCAACGAACAAGAGCATGCCGCTCTTGTGGACTGAGAACTGGACAGCACAgtgagttctt ... acgtaaacagGTACAGAGTATTCGGTGACCCTCCATCCCAGCGTTCTGCTGAGGACATT-G
EST: gi|71307605|gb|DR790023.1|DR790023
EST:     CCAACGAACAAGAGCATGCCGCTCTTGTGGACTGAGAACTGGACAGCACA                         GTACAGAGTATTCGGTGACCCTCCATCCCAGCGTTCTGCTGAGGACATTGC
genomic: CCAACGAACAAGAGCATGCCGCTCTTGTGGACTGAGAACTGGACAGCACAgtgagttctt ... acgtaaacagGTACAGAGTATTCGGTGACCCTCCATCCCAGCGTTCTGCTGAGGACATTGC