1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtatagcttcttatgcacgagcaataactgcatgattttttttccacatcgtagatagttgcttccatttgtgtctcccggtattcttgatttacatatcgatatcaatgttcttaattctgctttgtgtatcatttgagatgtgcatggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTGCTGAATTGACAAGGATAATTTATGGAG
species | Zea mays |
transcript | GRMZM2G146206_T04 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|150037302|gb|DY843516.1|DY843516
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|33101583|gb|CF061543.1|CF061543
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: ACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|38568995|gb|CF974880.1|CF974880
genomic: ACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAGGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|32936387|gb|CF041206.1|CF041206
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: CAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTTCAATGTTAGCCCTGCAGTTEST: gi|14243822|gb|BG841520.2|BG841520
genomic: CAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|67021888|gb|CO450637.1|CO450637
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|24767602|gb|CA402746.1|CA402746
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|149005098|gb|EE039627.2|EE039627
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTTTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|24769561|gb|CA404690.1|CA404690
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|149097485|gb|EE183357.2|EE183357
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|30591364|gb|CD052336.1|CD052336
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAGGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAAAAAGTGGCTCCNCTCCAATGTTAGCCEST: gi|71330644|gb|DR802095.1|DR802095
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCC
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|38229733|gb|CF920046.1|CF920046
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAGGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|16927318|gb|BM080387.1|BM080387
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|32851161|gb|CD990842.1|CD990842
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|149105683|gb|EE291241.2|EE291241
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|149095398|gb|EE181040.2|EE181040
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|32850309|gb|CD989990.1|CD989990
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: ACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|5791027|gb|AI977819.1|AI977819
genomic: ACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCCCTCCAATGTTAGCCCTGCAGTTEST: gi|71436570|gb|DR817620.1|DR817620
genomic: TGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|101388915|gb|EB816439.1|EB816439
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTTTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|31352539|gb|CD436896.1|CD436896
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|149097486|gb|EE183358.2|EE183358
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|149005099|gb|EE039628.2|EE039628
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|32931721|gb|CF036533.1|CF036533
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: ACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|37361179|gb|CF602468.1|CF602468
genomic: ACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAGGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|148971477|gb|EE022172.2|EE022172
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|37361339|gb|CF602628.1|CF602628
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAGGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|34391231|gb|CF384459.1|CF384459
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAGGTTGCAACTCCTGCTCAGGCTCAGGAN GTTCATGATGGTCTGAGAAAGTGGCTCCNCTCCAATGTTAGCCCTGCAGTTEST: gi|6012502|gb|AW061939.1|AW061939
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAGGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|110517584|gb|EE022171.1|EE022171
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|71757929|gb|DR955866.1|DR955866
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|78077610|gb|DV506044.1|DV506044
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCCACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|33770896|gb|CF273190.1|CF273190
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAGGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|148995363|gb|EE034577.2|EE034577
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|9743048|gb|BE519196.1|BE519196
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAGGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|33094011|gb|CF054005.1|CF054005
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|32909130|gb|CF013942.1|CF013942
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|32930797|gb|CF035609.1|CF035609
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|67017127|gb|CO445876.1|CO445876
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCANGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|211291624|gb|FL459848.1|FL459848
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|32941523|gb|CF046342.1|CF046342
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: ACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|31360263|gb|CD444620.1|CD444620
genomic: ACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|71330645|gb|DR802096.1|DR802096
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|148995362|gb|EE034576.2|EE034576
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTTTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|37361129|gb|CF602418.1|CF602418
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAGGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCTACTCCAATGTTAGCCCTGCAGTTEST: gi|34391269|gb|CF384497.1|CF384497
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAGGTTGCAACTCCTGCTCAGGCCCAGGAG GTTCATGATGGTCTGAEST: gi|31351356|gb|CD435713.1|CD435713
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGA
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|83278303|gb|DV942311.1|DV942311
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAGGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|33771263|gb|CF273442.1|CF273442
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAGGTTGCAACTCCTGCTCAGGCTCAGGAN GTTCATGATGGTCTGAEST: gi|38229553|gb|CF919866.1|CF919866
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGA
EST: TTTGGGCTATTGGTACCGGCAAGGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAEST: gi|31354853|gb|CD439210.1|CD439210
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGA
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|61118911|gb|DN559872.1|DN559872
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAGGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|16927255|gb|BM080324.1|BM080324
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|18178250|gb|BM379460.1|BM379460
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|67015285|gb|CO444034.1|CO444034
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|33093246|gb|CF053240.1|CF053240
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: ACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|211297519|gb|FL438922.1|FL438922
genomic: ACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|31628067|gb|CD526427.1|CD526427
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAGGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTEST: gi|110960987|gb|EE181039.1|EE181039
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
EST: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAG GTTCATGATGGTTTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
genomic: TTTGGGCTATTGGTACCGGCAAAGTTGCAACTCCTGCTCAGGCTCAGGAGgtatagcttc ... ggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTT
atcaatgttcttaattctgctttgtgtatcatttgagatgtgcatggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTGCTGAATTGACAAGGATAATTTATGGAG
tcttaat putative branch site (score: 350)
ttcttaatt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtatagcttcttatgcacgagcaataactgcatgattttttttccacatcgtagatagttgcttccatttgtgtctcccggtattcttgatttacatatcgatatcaatgttcttaattctgctttgtgtatcatttgagatgtgcatggtattgtagGTTCATGATGGTCTGAGAAAGTGGCTCCACTCCAATGTTAGCCCTGCAGTTGCTGAATTGACAAGGATAATTTATGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG