1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtgggtacatagtcttttaagtgtattgacatgttttttttctctgcaatcttctcctaacattgtttcatctgttaagGTTCGCCTGTGGGACTATGTAAATGGATGTCTCCTTGATACATTTCAAGCCAAAGATAAG
species | Zea mays |
transcript | GRMZM2G131998_T04 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: GCATATCTGANAACCAGAGTTTTCTTATATCAGGAGGAGGTGATTCAACT GTTCGCCTGTGGGACTATGTAAATGGATGTCTCCTTGATACATTTCAAGCCEST: gi|13149651|gb|BG319973.1|BG319973
genomic: GCATATCTGAAAACCAGAGTTTTCTTATATCAGGAGGAGGTGATTCAACTgtgggtacat ... atctgttaagGTTCGCCTGTGGGACTATGTAAATGGATGTCTCCTTGATACATTTCAAGCC
EST: GCATATCTGAAAACCAGAGTTTTCTTATATCAGGYGGAGGTGATTCAACT GTTCGCCTGTGGGACTATGTAAATGGATGTCTCCTTGATACATTTCAAGCCEST: gi|89761079|gb|DY689237.1|DY689237
genomic: GCATATCTGAAAACCAGAGTTTTCTTATATCAGGAGGAGGTGATTCAACTgtgggtacat ... atctgttaagGTTCGCCTGTGGGACTATGTAAATGGATGTCTCCTTGATACATTTCAAGCC
EST: CATATCTGAAAACCAGAGTTTTCTTATATCAGGAGGAGGTGATTNCA-CT GTTCGCCTGTGGGACTATGTAAATGGATGTCEST: gi|71437750|gb|DR818800.1|DR818800
genomic: CATATCTGAAAACCAGAGTTTTCTTATATCAGGAGGAGGTGATT-CAACTgtgggtacat ... atctgttaagGTTCGCCTGTGGGACTATGTAAATGGATGTC
EST: GCATATCTGAAAACCAGAGTTTTCTTATATCAGGAGGAGGTGATTCAACT GTTCGCCTGTGGGACTATGEST: gi|148973467|gb|EE024565.2|EE024565
genomic: GCATATCTGAAAACCAGAGTTTTCTTATATCAGGAGGAGGTGATTCAACTgtgggtacat ... atctgttaagGTTCGCCTGTGGGACTATG
EST: GCATATCTGAAAACCAGAGTTTTCTTATATCAGGAGGAGGTGATTCAACT GTTCGCCTGTGGGACTATGTAAATGGATGTCTCCTTGATACATTTCAAGCCEST: gi|78106892|gb|DV525310.1|DV525310
genomic: GCATATCTGAAAACCAGAGTTTTCTTATATCAGGAGGAGGTGATTCAACTgtgggtacat ... atctgttaagGTTCGCCTGTGGGACTATGTAAATGGATGTCTCCTTGATACATTTCAAGCC
EST: GCATATCTGANAACCAGAGTTTTCTTATATCAGGAGGAGGTGATTCAACT GTTCGCCTGTGGGACTATGTAAATGGATGTCTCCTTGATEST: gi|89759711|gb|DY688443.1|DY688443
genomic: GCATATCTGAAAACCAGAGTTTTCTTATATCAGGAGGAGGTGATTCAACTgtgggtacat ... atctgttaagGTTCGCCTGTGGGACTATGTAAATGGATGTCTCCTTGAT
EST: GCATATCTGAAAACCAGAGTTTTCTTATATCANGAGGAGGTGATTCAACT GTTCGCCTGTGGGACTATGTAAATGGATGTCTCCTTGATACATTTCAAGCCEST: gi|76017216|gb|DT944386.1|DT944386
genomic: GCATATCTGAAAACCAGAGTTTTCTTATATCAGGAGGAGGTGATTCAACTgtgggtacat ... atctgttaagGTTCGCCTGTGGGACTATGTAAATGGATGTCTCCTTGATACATTTCAAGCC
EST: GCATATCTGAAAACCAGAGTTTTCTTATATCAGGAGGAGGTGATTCAACT GTTCGCCTGTGGGACTAT
genomic: GCATATCTGAAAACCAGAGTTTTCTTATATCAGGAGGAGGTGATTCAACTgtgggtacat ... atctgttaagGTTCGCCTGTGGGACTAT
attgacatgttttttttctctgcaatcttctcctaacattgtttcatctgttaagGTTCGCCTGTGGGACTATGTAAATGGATGTCTCCTTGATACATTTCAAGCCAAAGATAAG
tcctaac putative branch site (score: 59)
tttcatct putative PPT
atgtttttttt TA-rich tract