1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtatgtggacatgtggttgtgtacactgttgcacttgattacctgattcagtgcatgggattaatgttgtgctattgtggtcaatcgtttccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCTGTGATTGGCTTAGTACAAGTTTTGGCTGATTATTTGTTGTCTCATACT
species | Zea mays |
transcript | GRMZM2G126594_T02 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAG GCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|67034878|gb|CO463411.1|CO463411
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|211047275|gb|FL465250.1|FL465250
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAACGGGCTCTATCTTCEST: gi|13149648|gb|BG319970.1|BG319970
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|76011925|gb|DT939095.1|DT939095
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAG GCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|9731798|gb|BE510550.1|BE510550
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATCGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAAGCTTAGAGAAGGGTCTCTATTTTCEST: gi|67025568|gb|CO454317.1|CO454317
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|29947113|gb|CB816488.1|CB816488
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAG GCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|44901076|gb|CK827621.1|CK827621
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|78026411|gb|DV494798.1|DV494798
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATCGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAAGCTTAGAGAAGGGTCTCTATTTTCEST: gi|71301597|gb|DR786861.1|DR786861
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAG GCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|211490985|gb|FL061097.1|FL061097
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAG GCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|31997674|gb|CD661710.1|CD661710
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAG GCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|50329072|gb|CO524198.1|CO524198
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAG GCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|76011924|gb|DT939094.1|DT939094
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAG GCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|40333920|gb|CK367990.1|CK367990
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|71301596|gb|DR786860.1|DR786860
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGACCCAGTGAAGAAAGAG GCCGAGTCTCAGATCGCACCCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|4610116|gb|AI600955.1|AI600955
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAG GCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|71319581|gb|DR796538.1|DR796538
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAG GCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|78089300|gb|DV517674.1|DV517674
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAG GCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|76286824|gb|DV026392.1|DV026392
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAG GCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|30088088|gb|CB886293.1|CB886293
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAG GCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|50333911|gb|CO529037.1|CO529037
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAG GCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|29946361|gb|CB816112.1|CB816112
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAG GCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|67043103|gb|CO469358.1|CO469358
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|45847409|gb|CN071352.1|CN071352
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|211490989|gb|FL061101.1|FL061101
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGEST: gi|9255119|gb|BE345587.1|BE345587
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGG
EST: GCCACATCGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAAGCTTAGAGAAGGGTCTCTATTTTCEST: gi|211493879|gb|FL061121.1|FL061121
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|211427864|gb|FL460788.1|FL460788
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|211001401|gb|FL437014.1|FL437014
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|211386229|gb|FL452890.1|FL452890
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATCGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGTCTCTGTTTTCEST: gi|14585587|gb|BI135339.1|BI135339
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|33101198|gb|CF061158.1|CF061158
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATCGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAAGCTTAGAGAAGGGTCTCTATTTTCEST: gi|33094670|gb|CF054664.1|CF054664
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATCGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAAGCTTAGAGAAGGGTCTCTATTTTCEST: gi|60394642|gb|DN227512.1|DN227512
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|31664276|gb|CD573001.1|CD573001
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAG GCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|76912495|gb|DV164760.1|DV164760
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAG GCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATTTTCEST: gi|14997333|gb|BI319308.1|BI319308
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|28576124|gb|CB282016.1|CB282016
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCCCATAGAGCTCATCTTGTCGGAGAAGGAAGAACCCGTGAAGAAAGAG GCCGAGTCTCAGATCGCAACCCGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|30088089|gb|CB886294.1|CB886294
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAG GCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|211490988|gb|FL061100.1|FL061100
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAA GCCGAGTCTCAGATCGCAACCAGAAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|213172413|gb|FM189295.1|FM189295
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATCGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAAGCTTAGAGAAGGGTCTCTATTTTCEST: gi|89755157|gb|DY685693.1|DY685693
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAG GCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|24765793|gb|CA400952.1|CA400952
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|31358169|gb|CD442526.1|CD442526
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAGCCANTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCEST: gi|33093515|gb|CF053509.1|CF053509
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCATATCGAGCTCATCTTGTCGGAGAAGGAAGAGCCAGTGAAGAAAGAG GCTGAGTCTCAGATCGCAACCAGGAAAGCTTAGAGAAGGGTCTCTATTTTCEST: gi|76912497|gb|DV164761.1|DV164761
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
EST: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAG GCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
genomic: GCCACATAGAGCTCATCTTGTCGGAGAAGGAAGAACCAGTGAAGAAAGAGgtatgtggac ... tccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTC
gattcagtgcatgggattaatgttgtgctattgtggtcaatcgtttccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCTGTGATTGGCTTAGTACAAGTTTTGGCTGATTATTTGTTGTCTCATACT
gattaat putative branch site (score: 3)
tcgtttccttttc putative PPT
attaatgtt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtatgtggacatgtggttgtgtacactgttgcacttgattacctgattcagtgcatgggattaatgttgtgctattgtggtcaatcgtttccttttcagGCCGAGTCTCAGATCGCAACCAGGAAGGCTTAGAGAAGGGGCTCTATCTTCTGTGATTGGCTTAGTACAAGTTTTGGCTGATTATTTGTTGTCTCATACT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT