1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtgtgcagatcacgacacttaaccagtatgtgtgtctaattgactttgttgagctgtttgaaattctaatcatgagcttgcagGAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAACGGAGTGGCTGGGGGAAACCAGAAACAAAATATACT
species | Zea mays |
transcript | GRMZM2G120517_T02 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: TGCTGACCAC-TGAGGGGAGGTATTCTACAGAATGGGCCTTAATGACAAG GAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAAEST: gi|24934386|gb|CA452604.1|CA452604
genomic: TGCTGACCACTTGA-GGGAGGTATTCTACAGAATGGGCCTTAATGACAAGgtgtgcagat ... gagcttgcagGAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAA
EST: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAG GAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAAEST: gi|71327463|gb|DR800349.1|DR800349
genomic: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAGgtgtgcagat ... gagcttgcagGAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAA
EST: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAG GAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAAEST: gi|67022725|gb|CO451474.1|CO451474
genomic: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAGgtgtgcagat ... gagcttgcagGAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAA
EST: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAG GAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAAEST: gi|101393103|gb|EB818482.1|EB818482
genomic: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAGgtgtgcagat ... gagcttgcagGAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAA
EST: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAG GAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAAEST: gi|18181579|gb|BM382789.1|BM382789
genomic: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAGgtgtgcagat ... gagcttgcagGAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAA
EST: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAG GAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAAEST: gi|60397958|gb|DN230774.1|DN230774
genomic: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAGgtgtgcagat ... gagcttgcagGAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAA
EST: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAG GAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAAEST: gi|7238058|gb|AW573325.1|AW573325
genomic: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAGgtgtgcagat ... gagcttgcagGAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAA
EST: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAG GAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAAEST: gi|74246091|gb|DT654005.1|DT654005
genomic: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAGgtgtgcagat ... gagcttgcagGAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAA
EST: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAG GAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAAEST: gi|60349847|gb|DN216820.1|DN216820
genomic: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAGgtgtgcagat ... gagcttgcagGAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAA
EST: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAG GAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAAEST: gi|211351874|gb|FK984289.1|FK984289
genomic: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAGgtgtgcagat ... gagcttgcagGAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAA
EST: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAG GAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAAEST: gi|76920121|gb|DV168019.1|DV168019
genomic: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAGgtgtgcagat ... gagcttgcagGAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAA
EST: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAG GAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAAEST: gi|60342528|gb|DN209501.1|DN209501
genomic: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAGgtgtgcagat ... gagcttgcagGAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAA
EST: CTTAATGACAAG GAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAAEST: gi|71759931|gb|DR957868.1|DR957868
genomic: CTTAATGACAAGgtgtgcagat ... gagcttgcagGAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAA
EST: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAG GAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAAEST: gi|88753851|gb|DY537992.1|DY537992
genomic: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAGgtgtgcagat ... gagcttgcagGAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAA
EST: TTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAG GAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAAEST: gi|7145161|gb|AW506642.1|AW506642
genomic: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAGgtgtgcagat ... gagcttgcagGAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAA
EST: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAG GAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAA
genomic: CTGCTGACCACTTGAGGGAGGTATTCTACAGAATGGGCCTTAATGACAAGgtgtgcagat ... gagcttgcagGAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAA
tgtgtgtctaattgactttgttgagctgtttgaaattctaatcatgagcttgcagGAAATTGTTGCCTTGTCTGGAGCACATACACTTGGAAGGTCCAGGCCTGAACGGAGTGGCTGGGGGAAACCAGAAACAAAATATACT
ttctaat putative branch site (score: 2)
tttgaaattctaat TA-rich tract