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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagtaatttctggttctagcatgctgctctacaatactcatggttaagtgcatgctgtcgtgcagagtaggttttagacgtattggttaattgagttaaatcaatgagtccatctttaaattttgtaaatatgtactctgattttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAACTGGGATATCCACCATTGATGTCATGAATTCCATTGCTCGTGGACAAAA

Basic information

species Zea mays
transcript GRMZM2G094497_T01
intron # 6
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G094497_T02 (Zea mays), 3'ss of exon 5
lower sequence: LOC_Os06g37180.1 (Oryza sativa), 3'ss of exon 6
gtaagtaatttct-ggttctagcatgctgctctacaatactcatggttaagtgcatgctgtcgtgcagagtaggttttagacgtattggttaattgagttaaatcaatgagtccatctttaaattttgtaaatatgtactctgat-tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAACTGGGATATCCACCATTGATGTCATGAATTCCATTGCTCGTGGACAAAA
||||||  || ||   |||  |    ||||| |  || | |||| |||||||||||| | |              ||||   |||  || |  |   | ||||   ||   ||  |  | | | | | |||  ||||  || ||| |||  | |||||||||| ||||| |||||||| |||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||| || |||||
gtaagtttttgctcaattcaggtgcactgctatggaa-attcatagttaagtgcatgttct--------------tttatcagtac-ggatggt--ggctaaacttatatttctcttctgataatat-taataatgtcttccgatgtttattccagGAAGTTCAATTAATCCCAGTGAAAGAACCTATCCAGAAGAGATGATCCAAACAGGGATATCAACCATTGATGTCATGAACTCCATTGCTCGAGGCCAAAA

upper sequence: GRMZM2G094497_T02 (Zea mays), 3'ss of exon 5
lower sequence: GLYMA18G48280.1 (Glycine max), 3'ss of exon 6
gtaagtaatttctggttctagcatgctgctctacaatactcatggttaagtgcatgctgtcgtgcagagtaggttttagacgtattggttaattgagttaaatcaatgagtccatctttaaattttgtaaatatgtactctgattttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAACTGGGATATCCACCATTGATGTCATGAATTCCATTGCTCGTGGACAAAA-
                                                                          | || |  |  |  |     |   | |||      ||   |||||   |||| ||||||| | | |||    |  | |||||||||| || ||||| ||||||||||||||||||||||||||||| || || || ||||| |||||||||||||||||||| |||||| | || ||||| 
--------------------------------------------------------------------------tatataatttcttctggggaggtctgaatatgcatgtttttctttgcctttt-taaatattttccctg----taattcaggAAGTTCCATCAACCCTAGTGAGAGAACCTATCCAGAGGAGATGATACAGACAGGAATATCTACCATTGATGTCATGAATTCTATTGCTAGAGGTCAAAAG

upper sequence: GRMZM2G094497_T02 (Zea mays), 3'ss of exon 5
lower sequence: GLYMA10G42940.2 (Glycine max), 3'ss of exon 6
gtaagtaatttctggttctagcatgctgctctacaatactcatggttaagtgcatgctgtcgtgcagagtaggttttagacgtattggttaattgagttaaatcaatgagtccatctttaaattttgtaaatatgtactctgattttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAACTGGGATATCCACCATTGATGTCATGAATTCCATTGCTCGTGGACAAAA
                                                             ||    |      |||  | || ||    |||||   ||  |  ||| ||  || ||||     |      || |  ||  | | ||   |||||||||| || || || |||||| ||||||| || ||||||||||| || ||||| ||||| || ||||||||||||||||| |||||| | || |||||
-------------------------------------------------------------gtatttaacttcctttgca-gtgttctacaattg---tatgttgatgtgtgaatttttacccccta-----atatcttcccaatatgt--cagGAAGTTCCATCAATCCTAGTGAGCGAACCTACCCTGAGGAGATGATACAGACTGGAATATCTACAATTGATGTCATGAATTCTATTGCTAGAGGTCAAAA

upper sequence: GRMZM2G094497_T02 (Zea mays), 3'ss of exon 5
lower sequence: GLYMA09G38110.2 (Glycine max), 3'ss of exon 6
gtaagtaatttctggttctagcatgctgctctacaatactcatggttaagtgcatgctgtcgtgcagagtaggttttagacgtattggttaattgagttaaatcaatgagtccatctttaaattttgtaaatatgtactctgattttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAACTGGGATATCCACCATTGATGTCATGAATTCCATTGCTCGTGGACAAAA
                                                                        || | | |  | ||  |     |   | |||   |  ||  ||||||   |||| | ||||| | | |      |  | |||||||||| || ||||| ||||||||||||||||| ||||||||||| || || |||||||| |||||||||||||||||||| |||||| | || |||||
------------------------------------------------------------------------gtataaaatttcttc-tggggaggtatgaatatgtatgtttatctttgcctttt-ttaatatatccccca----taattcagGAAGTTCCATCAACCCTAGTGAGAGAACCTATCCTGAGGAGATGATACAGACAGGGATATCTACCATTGATGTCATGAATTCTATTGCTAGAGGTCAAAA

upper sequence: GRMZM2G094497_T02 (Zea mays), 3'ss of exon 5
lower sequence: GLYMA20G24070.1 (Glycine max), 3'ss of exon 7
gtaagtaatttctggttctagcatgctgctctacaatactcatggttaagtgcatgctgtcgtgcagagtaggttttagacgtattggttaattgagttaaatcaatgagtccatctttaaattttgtaaatatg-tactctgattttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAACTGGGATATCCACCATTGATGTCATGAATTCCATTGCTCGTGGACAAAA
                                                                       |  |||| |    || |   | ||   || |    |  ||  || | | | |||| |     |  ||   |     |  | |||||||||| || || || ||||||||||||||||| ||||||||||| || || || ||||| || ||||||||||||||||| |||||| | || |||||
-----------------------------------------------------------------------gtatttaaattcctttgc--agtgttctacaattgtatgttgatgtgtgagttttttccccctaatatcttcccaatatttcagGAAGTTCCATCAATCCTAGTGAGAGAACCTATCCTGAGGAGATGATACAGACAGGAATATCTACAATTGATGTCATGAATTCTATTGCTAGAGGTCAAAA

upper sequence: GRMZM2G094497_T02 (Zea mays), 3'ss of exon 5
lower sequence: AT4G38510.5 (Arabidopsis thaliana), 3'ss of exon 7
gtaagtaatttctggttctagcatgctgctctacaatactcatggttaagtgcatgctgtcgtgcagagtaggttttagacgtattggttaattgagttaaatcaatgagtccatctttaaattt-----tgtaaatatgtactctgattttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAACTGGGATATCCACCATTGATGTCATGAATTCCATTGCTCGTGGACAAAA
                                                                           | ||  |  || |    |||    | |   |  |   |||  | |||        | ||| | |  ||| |  |||  || ||||||||||||| || |||||||||||||||||||| || |||||||| || || || ||||||||||||||||||||||| || || ||  | ||||| ||
--------------------------------------------------------------------------gtgagctgctttagcctcttgtcacataattactatctcataataaaacacacagatataattctagacttttgttt--ctccagGAAGTTCTATCAATCCCAGTGAGAGAACCTATCCTGAAGAGATGATTCAGACGGGTATATCCACCATTGATGTCATGAACTCTATCGCCAGAGGACAGAA

upper sequence: GRMZM2G094497_T02 (Zea mays), 3'ss of exon 5
lower sequence: AT1G20260.1 (Arabidopsis thaliana), 3'ss of exon 6
gtaagtaatttctggttctagcatgctgctctacaatactcatggttaagtgcatgctgtcgtgcagagtaggttttagacgtattggttaattgagttaaatcaatgagtccatctttaaattttgtaaatatgtactctgattttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAACTGGGATATCCACCATTGATGTCATGAATTCCATTGCTCGTGGACAAAA
                                                             | |||  |   |  | |     |||| |    |||    ||  ||  | ||  | |||||||| | |   |   ||     |||||  |  ||||||||| || ||||||||||| |||||||| || || |||||||| ||||| ||||| || ||||||||||||||||| ||||||||||||||||| ||
-----------------------------------------------------------gtgagcattgactgcctcaagtcaattg-tactctgaagagaaggaaaaaatctgt-tttaaattgtttcggtcgata-----atttt--tatagGAAGTTCAATCAACCCCAGTGAAAGAACCTACCCTGAAGAGATGATACAAACGGGGATTTCTACCATTGATGTCATGAACTCCATTGCTCGTGGACAGAA

upper sequence: GRMZM2G094497_T02 (Zea mays), 3'ss of exon 5
lower sequence: AT1G76030.1 (Arabidopsis thaliana), 3'ss of exon 6
gtaagtaatttctggttctagcatgctgctctacaatactcatggttaagtgcatgctgtcgtgcagagtaggttttagacgtattggttaattgagttaaatcaatgagtccatctttaaattttgtaaatatgtactc-tgattttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAACTGGGATATCCACCATTGATGTCATGAATTCCATTGCTCGTGGACAAAA
                                                                  ||| |  |   ||    |||  |  |||||| |   | ||  | |   || ||   | ||  |||| |  | || | || ||| |  ||||||||| || ||||||||||| ||||||||||| || |||||||| || || || ||||| ||||| ||||||||||||||||||||||||||||| ||
----------------------------------------------------------------gtgagcaactaagaggacaattattccattgagatctctgaagcaatgtttcatttgttcttaaaaatgtcaattccttatattgat--agGAAGTTCAATCAACCCCAGTGAAAGAACCTATCCTGAAGAGATGATACAGACAGGCATATCGACCATCGATGTCATGAATTCCATTGCTCGTGGACAGAA

upper sequence: GRMZM2G094497_T02 (Zea mays), 3'ss of exon 5
lower sequence: Vv18s0001g01020.t01 (Vitis vinifera), 3'ss of exon 6
gtaagtaatttctggttctagcatgctgctctacaatactcatggttaagtgcatgctgtcgtgcagagtaggttttagacgtattggttaattgagttaaatcaatgagtccatctttaaattttgtaaatatgtactctgattttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAACTGGGATATCCACCATTGATGTCATGAATTCCATTGCTCGTGGACAAAA
                                                 ||   |  ||    | |||  | | ||||     |   | ||   ||    | |  |||     ||||  | || |  ||||  | | |  ||  |||     |||||||||||| ||||||||||||||||||||||| || |||||||| ||||| ||||| || || |||||||||||||| ||||||||||| || |||||
-------------------------------------------------gtcagtaatgctaggaagataatgatttattaccaaaagctagg-gaaaagattttatg---ttatctggatatataataaac-tcttccttgtcttt--catagGAAGTTCTATCAACCCCAGTGAGAGAACCTATCCTGAAGAGATGATACAAACAGGGATTTCTACTATTGATGTCATGAACTCCATTGCTCGAGGTCAAAA

upper sequence: GRMZM2G094497_T02 (Zea mays), 3'ss of exon 5
lower sequence: Vv03s0038g02760.t01 (Vitis vinifera), 3'ss of exon 6
gtaagtaatttctggttctagcatgctgctctacaatactcatggttaagtgcatgctgtcgtgcagagtaggttttagacgtattggttaat---tgagttaaatcaatgagtccatctttaaattttgtaaatatgtactctgattttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAACTGGGATATCCACCATTGATGTCATGAATTCCATTGCTCGTGGACAAAA
                                                 |||  |  | | |      |||   ||||  | |      | |    |||  |  |    | |   ||     | ||  ||||    | | || |  ||||  | |||| ||||| || || || ||||||||||| ||||| || ||||||||||| || ||||| || || ||||||||||||||||| |||||  | ||||| ||
-------------------------------------------------gtgagttttttaggaggtggtattatttaaccattaaaactcacctctgaactttagagtttacaacagtggcagatcctgtactctttttctttcctttt--ttcagGGAGTTCCATCAATCCTAGTGAGAGAACATATCCTGAAGAGATGATCCAGACAGGGATTTCTACAATTGATGTCATGAATTCTATTGCCAGAGGACAGAA

upper sequence: GRMZM2G094497_T02 (Zea mays), 3'ss of exon 5
lower sequence: PP1S100_117V6.1 (Physcomitrella patens), 3'ss of exon 6
gtaagtaatttctggttctagcatgctgctctacaatactcatggttaagtgcatgctgtcgtgcagagtaggttttagacgtattggttaattgagttaaatcaatgagtccatctttaaattttgtaaatatgtactctgattttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAACTGGGATATCCACCATTGATGTCATGAATTCCATTGCTCGTGGACAAAA
                               | |  | | |  | ||  || ||   | |  |    |   || |  | |  | ||||   |||  ||     | ||||    ||   || |||   |||| |       |||| | ||| ||||   ||| || ||||| |||||| | || || || ||||||||||| |||||||| ||||| ||||||||||||||||| || |||||||| || |||||
------------------------------gtgct-tgcactcgctttggtacaccttataatcggtaactggctgcaaa-attttggaatattttgt----gctatga----attgctatattcgttaaacagtctacttgatgtggcttcagGTGCTTCAATCAACCCTAGTGAGCGGACATACCCTGAGGAGATGATTCAAACTGGAATATCTACCATTGATGTCATGAACTCTATTGCTCGAGGTCAAAA

upper sequence: GRMZM2G094497_T02 (Zea mays), 3'ss of exon 5
lower sequence: PP1S425_12V6.1 (Physcomitrella patens), 3'ss of exon 5
gtaagtaatttctggttctagcatgctgctctacaatactcatggttaagtgcatgctgtcgtgcagagtaggttttagacgtattggttaattgagttaaatcaatgagtccatctttaaattttgtaaatatgtactctgattttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAACTGGGATATCCACCATTGATGTCATGAATTCCATTGCTCGTGGACAAAA
                                                 ||||   || | |      ||   ||  |      |  |    |||   ||  |     ||         | ||||  | | ||   | | |||  |  |  ||||   ||| || || || |||||  | || ||||| ||||||||||| || || || ||||| || |||||||||||||| ||||| ||| | ||||||||
-------------------------------------------------gtgcggtcttttgctt---gtcttttccactaacctcagcatcttggaatattttttaaagattgaag--agatttgcttattagtcaatttgacatgacctcagGTGCTTCGATCAATCCAAGTGAACGGACGTATCCTGAGGAGATGATTCAGACAGGAATATCTACGATTGATGTCATGAACTCCATCGCTAGAGGACAAAA

upper sequence: GRMZM2G094497_T02 (Zea mays), 3'ss of exon 5
lower sequence: PP1S85_75V6.1 (Physcomitrella patens), 3'ss of exon 6
gtaagtaatttctggttctagcatgctgctctacaatactcatggttaagtgcatgctgtcgtgcagagtaggttttagacgtattggttaattgagttaaatcaatgagtccatctttaaattttgtaaatatgtactctgattttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAACTGGGATATCCACCATTGATGTCATGAATTCCATTGCTCGTGGACAAAA
                                          |  ||      |  ||  |   ||   ||    |||| || |  || |  | ||      ||    | |       ||||| |  | |||||    |  ||| |     ||||    || || || || |||||| | || || |||||||||||||| ||||| || ||||| || |||||||||||||| || |||||||| || |||||
-----------------------------------------gtacttccccttacactacc-cacattctactcattagccgca--ggctcttggaacc--ttcggaaaattttgaagtaaatatgtttaatattatattcgatctgatcacagGTGCATCGATCAATCCTAGTGAGCGGACGTACCCAGAGGAGATGATTCAAACAGGAATATCTACGATTGATGTCATGAACTCTATTGCTCGAGGGCAAAA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|194716810|gb|FK933969.1|FK933969
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211469120|gb|FL062058.1|FL062058
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTTCTATTAACCCCAGTGAGAGAAC-TATCCAGAGGAGATGATCCA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTT-CTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCA
EST: gi|211476700|gb|FL062101.1|FL062101
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211466590|gb|FL062041.1|FL062041
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211459011|gb|FL062002.1|FL062002
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCCAGAG-AGATGATCCAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCC-AGAGGAGATGATCCAA
EST: gi|211042632|gb|FL062114.1|FL062114
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCANGAGGAGATGATCCAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCA-GAGGAGATGATCCAA
EST: gi|58029618|gb|CX725045.1|CX725045
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|32829975|gb|CD969653.1|CD969653
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|31358862|gb|CD443219.1|CD443219
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211474177|gb|FL062085.1|FL062085
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211042620|gb|FL062102.1|FL062102
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|32838409|gb|CD978087.1|CD978087
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|13150538|gb|BG320860.1|BG320860
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|32831681|gb|CD971359.1|CD971359
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211466588|gb|FL062039.1|FL062039
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211045586|gb|FL062118.1|FL062118
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|32910787|gb|CF015599.1|CF015599
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211476689|gb|FL062090.1|FL062090
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211459001|gb|FL061992.1|FL061992
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211474168|gb|FL062076.1|FL062076
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211469113|gb|FL062051.1|FL062051
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211464051|gb|FL062022.1|FL062022
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|31355490|gb|CD439847.1|CD439847
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211466591|gb|FL062042.1|FL062042
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211466583|gb|FL062034.1|FL062034
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GGAAGT-CTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagG-AAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAA
EST: gi|211464054|gb|FL062025.1|FL062025
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAAGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211476695|gb|FL062096.1|FL062096
EST:     ATTGACAATGGCCCCCCGATATTGCCCGAAAGC-TACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGA
genomic: ATTGACAATGGCCCCCCGATATTGCCCGAA-GCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGA
EST: gi|32929168|gb|CF033980.1|CF033980
EST:     TATTGACAATGGCCCNCCGATATCGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|33101985|gb|CF061945.1|CF061945
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|32928560|gb|CF033372.1|CF033372
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211464058|gb|FL062029.1|FL062029
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GGAGTTCTATTAACCCCAGTGAGAGGACCTATCCAGAGGAGATGNATCCAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATG-ATCCAA
EST: gi|211459012|gb|FL062003.1|FL062003
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211042625|gb|FL062107.1|FL062107
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211464059|gb|FL062030.1|FL062030
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211042624|gb|FL062106.1|FL062106
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GGAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|31349484|gb|CD433841.1|CD433841
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211355897|gb|FL061985.1|FL061985
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAAGTGAGA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCA-GTGAGA
EST: gi|14191177|gb|BG833407.1|BG833407
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|31351385|gb|CD435742.1|CD435742
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211042627|gb|FL062109.1|FL062109
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211461526|gb|FL062008.1|FL062008
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211471646|gb|FL062071.1|FL062071
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCTCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211466592|gb|FL062043.1|FL062043
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GGAGTTCTATTAACCCC
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCC
EST: gi|211042631|gb|FL062113.1|FL062113
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211355900|gb|FL061988.1|FL061988
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GGAAGT-CTATTAACCCCAGTGAGAGAAC-TATCCAGA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagG-AAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGA
EST: gi|31351754|gb|CD436111.1|CD436111
EST:     TATTGACACTGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211042628|gb|FL062110.1|FL062110
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCCAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211474179|gb|FL062087.1|FL062087
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|33094782|gb|CF054776.1|CF054776
EST:     TATTGACAATGG-CCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211471645|gb|FL062070.1|FL062070
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|33102163|gb|CF062123.1|CF062123
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTTTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|67020067|gb|CO448816.1|CO448816
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211461527|gb|FL062009.1|FL062009
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGAT
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGAT
EST: gi|32850751|gb|CD990432.1|CD990432
EST:     TATTGACAATGGCCCCNCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGACGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211476699|gb|FL062100.1|FL062100
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAAACCTATC-AGAGGAGATGATCCAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAA-CCTATCCAGAGGAGATGATCCAA
EST: gi|31628315|gb|CD526548.1|CD526548
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211469119|gb|FL062057.1|FL062057
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|14191176|gb|BG833406.1|BG833406
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|32850726|gb|CD990407.1|CD990407
EST:     GATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGACGATCCAAA
genomic: GATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211469112|gb|FL062050.1|FL062050
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211459007|gb|FL061998.1|FL061998
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211474171|gb|FL062079.1|FL062079
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|13490658|gb|BG517422.1|BG517422
EST:     TATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|33101471|gb|CF061431.1|CF061431
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTTTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211469111|gb|FL062049.1|FL062049
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|33102084|gb|CF062044.1|CF062044
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211471641|gb|FL062066.1|FL062066
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211464050|gb|FL062021.1|FL062021
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211474175|gb|FL062083.1|FL062083
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|32831612|gb|CD971290.1|CD971290
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211459003|gb|FL061994.1|FL061994
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211464057|gb|FL062028.1|FL062028
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GGAAGT-CTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCCA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagG-AAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAA
EST: gi|31358847|gb|CD443204.1|CD443204
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|33102277|gb|CF062237.1|CF062237
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211469108|gb|FL062046.1|FL062046
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|211466585|gb|FL062036.1|FL062036
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
EST: gi|31351755|gb|CD436112.1|CD436112
EST:     TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTG                         GAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA
genomic: TATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1383

CCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGTTCTGGAAAACCTATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAACTGGGATATCCACCATTGATGTCATGAATTCCATTGCTCGTGGACAAAA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 2455

CCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGTTCTGGAAAACCTATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAACTGGGATATCCACCATTGATGTCATGAATTCCATTGCTCGTGGACAAAA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1401

CCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGTTCTGGAAAACCTATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAACTGGGATATCCACCATTGATGTCATGAATTCCATTGCTCGTGGACAAAA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 2190

CCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGTTCTGGAAAACCTATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACTTGGATATCTCTGgtaagtaatt ... tttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAACTGGGATATCCACCATTGATGTCATGAATTCCATTGCTCGTGGACAAAA




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aaatcaatgagtccatctttaaattttgtaaatatgtactctgattttgctgcagGAAGTTCTATTAACCCCAGTGAGAGAACCTATCCAGAGGAGATGATCCAAACTGGGATATCCACCATTGATGTCATGAATTCCATTGCTCGTGGACAAAA
                                      ctctgat  putative branch site (score: 2190)
                                            ttttgct  CT-rich tract
              atctttaaattttgta  TA-rich tract