1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtcggctcagatcacatctccaacgaactcactcgttcgttcgcattgggttacttgctgatgattggcgctgatgcagGTCGCCATCGACATCGACTACCACCATAACATGTACGCCTCGCACCAGAAGGTGAACCCCAAGGAGGTCATCGTCGGATGGTGAGCAACCATCCCCTGGG
species | Zea mays |
transcript | GRMZM2G025214_T04 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: TCCACGTCCGCAACTCCTATGTCGTCCCCCACAGCGAGTCAGCCGACCAG GTCGCCATCGACATCGACTACCACCATAACATGTACGCCTCGCACCAGAAGEST: gi|91875888|gb|EB405845.1|EB405845
genomic: TCCACGTCCGCAACTCCTATGTCGTCCCCCACAGCGAGTCAGCCGACCAGgtcggctcag ... gctgatgcagGTCGCCATCGACATCGACTACCACCATAACATGTACGCCTCGCACCAGAAG
EST: TCCACGTCCGCAACTCCTATGTCGTCCCCCACAGCGAGTCAGCCGACCAG GTCGCCATCGACATCEST: gi|211273470|gb|FL057445.1|FL057445
genomic: TCCACGTCCGCAACTCCTATGTCGTCCCCCACAGCGAGTCAGCCGACCAGgtcggctcag ... gctgatgcagGTCGCCATCGACATC
EST: TCCACGTCCGCAACTCCTATGTCGTCCCCCACAGCGAGTCAGCCGACCAG GTCGCCATCGACATCGACTACCACCATAACATGTACGCCTCGCACCAGAAGEST: gi|211117498|gb|FL139017.1|FL139017
genomic: TCCACGTCCGCAACTCCTATGTCGTCCCCCACAGCGAGTCAGCCGACCAGgtcggctcag ... gctgatgcagGTCGCCATCGACATCGACTACCACCATAACATGTACGCCTCGCACCAGAAG
EST: TCCACGTCCGCAACTCCTATGTCGTCCCCCACAGCGAGTCAGCCGACCAG GTCGCCATCGACATCGACTACCACCATAACATGTACGCCTCGCACCAGAAG
genomic: TCCACGTCCGCAACTCCTATGTCGTCCCCCACAGCGAGTCAGCCGACCAGgtcggctcag ... gctgatgcagGTCGCCATCGACATCGACTACCACCATAACATGTACGCCTCGCACCAGAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtcggctcagatcacatctccaacgaactcactcgttcgttcgcattgggttacttgctgatgattggcgctgatgcagGTCGCCATCGACATCGACTACCACCATAACATGTACGCCTCGCACCAGAAGGTGAACCCCAAGGAGGTCATCGTCGGATGGTGAGCAACCATCCCCTGGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG