1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaaggacctattagtacctcttattctcgattgtccttcacaagttgtagtacgcaagcaagacttttgagtttagacctttcttgcttccatcaaagactaggtaggacccatgtgatcctatacatttcatcaatgaactttgaaatagtaagcattttggattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCTTCAGTGCTGCAGTTGAAGCCTGGGATGCAGAATTTTATGTCAAAGTTG
species | Zea mays |
transcript | GRMZM2G000393_T01 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|78093005|gb|DV521379.1|DV521379
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|71435122|gb|DR816172.1|DR816172
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|32834517|gb|CD974195.1|CD974195
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|149106895|gb|EE188795.2|EE188795
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|76920610|gb|DV168260.1|DV168260
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|31359008|gb|CD443365.1|CD443365
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|60338589|gb|DN205562.1|DN205562
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|31357853|gb|CD442210.1|CD442210
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|71436236|gb|DR817286.1|DR817286
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATTTTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|50323552|gb|CO518678.1|CO518678
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: CGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|149096405|gb|EE182139.2|EE182139
genomic: CGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|4775973|gb|AI664976.1|AI664976
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: GACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|78021331|gb|DV489718.1|DV489718
genomic: GACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|60346760|gb|DN213733.1|DN213733
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|71426993|gb|DR808043.1|DR808043
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|149005474|gb|EE040029.2|EE040029
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|61119808|gb|DN560769.1|DN560769
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|50323553|gb|CO518679.1|CO518679
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|94479524|gb|EB708482.1|EB708482
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|149064607|gb|EE286478.2|EE286478
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|60344825|gb|DN211798.1|DN211798
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|71311661|gb|DR792235.1|DR792235
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|32839844|gb|CD979525.1|CD979525
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|148994442|gb|EE034088.2|EE034088
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|71435123|gb|DR816173.1|DR816173
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|71772159|gb|DR970096.1|DR970096
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|22521196|gb|BU080007.1|BU080007
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGEST: gi|149096404|gb|EE182138.2|EE182138
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAG
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|110200892|gb|EC882789.1|EC882789
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: AAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAANNNNNEST: gi|5525207|gb|AI861205.1|AI861205
genomic: AAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAEST: gi|211281812|gb|FL349985.1|FL349985
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAA
EST: GTAATATTGATGATGAANNATCG-CAGAACAA-GGACTTCTTGATTTCTT GAA-GTCATGAAGAAGCTGCAGAAEST: gi|67038278|gb|CO464608.1|CO464608
genomic: GTAATATTGATGATGAAA-ATCGGCAGA-CAAAGGACTTCTTGATT-CTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAA
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|78093004|gb|DV521378.1|DV521378
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|211130920|gb|FL136658.1|FL136658
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: AAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTBATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|60346466|gb|DN213439.1|DN213439
genomic: AAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|32928809|gb|CF033621.1|CF033621
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|148940752|gb|EC885572.2|EC885572
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: GATGAAAATCGGCAGACAAAGGACTTCTTGATTTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTEST: gi|71436237|gb|DR817287.1|DR817287
genomic: GATGAAAATCGGCAGACAAAGGACTTCTTGA-TTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTT
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTCCCGAGCAAAGCAAAAATTTTCEST: gi|71772160|gb|DR970097.1|DR970097
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|32839845|gb|CD979526.1|CD979526
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|148938471|gb|EC882790.2|EC882790
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|31350524|gb|CD434881.1|CD434881
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGGCTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCEST: gi|71426994|gb|DR808044.1|DR808044
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCNAAAATTTTCEST: gi|5124017|gb|AI745858.1|AI745858
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
EST: -CCGTAATA-TGATGATG-AAATCGGCAGACAAAGGACTTCTTGATTCTT GAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
genomic: ACCGTAATATTGATGATGAAAATCGGCAGACAAAGGACTTCTTGATTCTTgtaaggacct ... gattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTC
atcctatacatttcatcaatgaactttgaaatagtaagcattttggattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCTTCAGTGCTGCAGTTGAAGCCTGGGATGCAGAATTTTATGTCAAAGTTG
tttgaaata TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaaggacctattagtacctcttattctcgattgtccttcacaagttgtagtacgcaagcaagacttttgagtttagacctttcttgcttccatcaaagactaggtaggacccatgtgatcctatacatttcatcaatgaactttgaaatagtaagcattttggattgggcagGAAAGTCATGAAGAGGCTGCAGAAGAATTACCGAGCAAAGCAAAAATTTTCTTCAGTGCTGCAGTTGAAGCCTGGGATGCAGAATTTTATGTCAAAGTTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC