1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtaggctgcaggctgtatctatttcaaattttaactgaagaaactggtttcttttaacttactagctatcgttatttgcgtgcagACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTTCTCATGTGATGTTGTGCTTTATATTTTGGGGGTGACGACGGAGTATCTA
species | Zea mays |
transcript | GRMZM5G883149_T03 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: CTGAAAAGGTGTCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAG ACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTTEST: gi|211335317|gb|FL100773.1|FL100773
genomic: CTGAAAAGGTGTCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAGgtaggctgca ... ttgcgtgcagACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTT
EST: CTGAAAAGGTGTCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAG ACTTTAGTCAATGCCCEST: gi|60344091|gb|DN211064.1|DN211064
genomic: CTGAAAAGGTGTCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAGgtaggctgca ... ttgcgtgcagACTTTAGTCAATGCCC
EST: CTGAAAAGGTGTCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAG ACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTTEST: gi|166429976|gb|EG169952.1|EG169952
genomic: CTGAAAAGGTGTCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAGgtaggctgca ... ttgcgtgcagACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTT
EST: GTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAG ACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTTEST: gi|32937965|gb|CF042784.1|CF042784
genomic: GTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAGgtaggctgca ... ttgcgtgcagACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTT
EST: TTGAAAAGGTGCCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAG ACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTTEST: gi|50324980|gb|CO520106.1|CO520106
genomic: CTGAAAAGGTGTCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAGgtaggctgca ... ttgcgtgcagACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTT
EST: CTGAAAAGGTGTCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAG ACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTTEST: gi|50324981|gb|CO520107.1|CO520107
genomic: CTGAAAAGGTGTCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAGgtaggctgca ... ttgcgtgcagACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTT
EST: CTGAAAAGGTGTCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAG ACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTTEST: gi|211477574|gb|FL100774.1|FL100774
genomic: CTGAAAAGGTGTCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAGgtaggctgca ... ttgcgtgcagACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTT
EST: CTGAAAAGGTGTCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAG ACTTTAGTCAATGCCCTAACGCAAGCAAGAEST: gi|116827357|gb|EC871252.1|EC871252
genomic: CTGAAAAGGTGTCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAGgtaggctgca ... ttgcgtgcagACTTTAGTCAATGCCCTAACGCAAGCAAGA
EST: CTGAAAAGGTGTCTGGTCACGGATCGGAGGGTGCGTCATCGGCTGAGCAG ACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTTEST: gi|40303119|gb|CK347506.1|CK347506
genomic: CTGAAAAGGTGTCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAGgtaggctgca ... ttgcgtgcagACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTT
EST: CTGAAAAGGTGTCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAG ACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTTEST: gi|211529711|gb|FL481418.1|FL481418
genomic: CTGAAAAGGTGTCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAGgtaggctgca ... ttgcgtgcagACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTT
EST: CTGAAAAGGTGTCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAG ACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTTEST: gi|166651131|gb|EG138260.1|EG138260
genomic: CTGAAAAGGTGTCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAGgtaggctgca ... ttgcgtgcagACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTT
EST: GAAAAGGTGCCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAG ACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCEST: gi|5714079|gb|AI944064.1|AI944064
genomic: GAAAAGGTGTCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAGgtaggctgca ... ttgcgtgcagACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTC
EST: CTGAAAAGGTGTCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAG ACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTTEST: gi|113703727|gb|EE681231.1|EE681231
genomic: CTGAAAAGGTGTCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAGgtaggctgca ... ttgcgtgcagACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTT
EST: CTGAAAAGGTGTCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAG ACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTT
genomic: CTGAAAAGGTGTCTGGTCACGGATCGGAGGGTGCTTCATCGGCTGAGCAGgtaggctgca ... ttgcgtgcagACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTT
ttaactgaagaaactggtttcttttaacttactagctatcgttatttgcgtgcagACTTTAGTCAATGCCCTAACGCAAGCAAGAGAGCATCTGGCGAAGTCTCTTCTCATGTGATGTTGTGCTTTATATTTTGGGGGTGACGACGGAGTATCTA
aacttac putative branch site (score: 2)
tttcttttaactta TA-rich tract