1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtaaaccgtatgtttttgaaagatatcttcttgttttccctttttctgtgtgtgggtgggtgggggagggggggggtctgttcgacagtttaacaagtatagccttgccaatttgcagGTCTAACTTCCTTGGCACAAGATTTTTAATTTATGATACACAACCGCCCTATAATGGGGCTGTAGTTCCTCCTGCCGGAAGGACAAGCAGGAGGTTCAAC
species | Zea mays |
transcript | GRMZM5G866954_T03 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TGGAAAAATAAG GTCTAACTTCCTAGGCACAAGATTTTTAATTTATGATACACAAGCC-CCCTEST: gi|18660975|gb|BM501146.1|BM501146
genomic: TGGAAAAATAAGgtaaaccgta ... caatttgcagGTCTAACTTCCTTGGCACAAGATTTTTAATTTATGATACACAA-CCGCCCT
EST: GGCAACATCTCAAGATCAAAAAGAACCTACATTGGAAAAATAAG GTCTAACTTCCTTGGCACAAGATTTTTAATTTATGATACACAACCGCCCTAEST: gi|211384506|gb|FL034444.1|FL034444
genomic: GGCAACATCTCAAGATCAAAAAGAACCTACATTGGAAAAATAAGgtaaaccgta ... caatttgcagGTCTAACTTCCTTGGCACAAGATTTTTAATTTATGATACACAACCGCCCTA
EST: TGGAAAAATAAG GTCTAACTTCCTAGGCACAAGATTTTTAATTTATGATACACAAGCC-CCCTEST: gi|211384501|gb|FL034439.1|FL034439
genomic: TGGAAAAATAAGgtaaaccgta ... caatttgcagGTCTAACTTCCTTGGCACAAGATTTTTAATTTATGATACACAA-CCGCCCT
EST: TGGAAAAATAAG GTCTAACTTCCTAGGCACAAGATTTTTAATTTATGATACACAAGCC-CCCT
genomic: TGGAAAAATAAGgtaaaccgta ... caatttgcagGTCTAACTTCCTTGGCACAAGATTTTTAATTTATGATACACAA-CCGCCCT
gggagggggggggtctgttcgacagtttaacaagtatagccttgccaatttgcagGTCTAACTTCCTTGGCACAAGATTTTTAATTTATGATACACAACCGCCCTATAATGGGGCTGTAGTTCCTCCTGCCGGAAGGACAAGCAGGAGGTTCAAC
gtttaac putative branch site (score: 87)
ccttgcc putative PPT
tttaacaa TA-rich tract