Skip to another splice site:
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 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...atgcaaattagttaccttatcaagtatgactctatgagatgtttaaacttttgaaggacagtatcatgttcattgttgatttatctgctgactgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATGGTCATGGCAGTTTCCTGTGCTAAG

Basic information

species Zea mays
transcript GRMZM2G702490_T01
intron # 5
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G702490_T02 (Zea mays), 3'ss of exon 7
lower sequence: LOC_Os08g32850.2 (Oryza sativa), 3'ss of exon 5
--atgcaaattagttaccttatcaagtatgactct---atgagatgtttaaac-ttttgaaggacagtatcatgttcattgttgatttatctgctgactgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATGGTCATGGCAGTTTCCTGTGCTAAG
   | ||| |||     | |||   || ||| | |   || |  | ||||  | ||||||| || | | | |     ||||||  || ||   | | |  || ||||| || ||||| |||||||| ||||||||||| ||||| |||||||| ||||| ||||||||||||||| | |||
cactacaacttaacgtacatattg-gtttgattttgaaataacttctttagcccttttgaatgataatttga-----attgttatttgatggcccgtccactatagGTTGGGTCAAAATCTGAAGCAAGTGGAATTGCAAAAGCGGGAGCAAAAATGGTTATGGCAGTTTCCTGTTCCAAG

upper sequence: GRMZM2G702490_T02 (Zea mays), 3'ss of exon 7
lower sequence: AT4G34030.1 (Arabidopsis thaliana), 3'ss of exon 6
atgcaaattagttaccttatcaagtatgac-tctatgagatgtttaaacttttga----aggacagtatcatgttcattgttgatttatctgctgactgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATGGTCATGGCAGTTTCCTGTGCTAAG
                     || | |    | | ||   ||||   || ||||     |  | ||| ||    ||  | ||  ||  || | |      | ||||| || || |   |||| || |  || ||||| ||||||||||| || ||||| |||||||| ||||||||||||
-------------------gtaattgtagtgtttgtgttgtgttctcacatttggctatataagagtgtctctatctatcttacttgctccgtttttgcttatagGTGGGTTCTAGAGCTGAGGCCAACGGCATTGCAAAAGCTGGAGCGAAAATGGTGATGGCAGTATCCTGTGCTAAG
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|18174183|gb|BM349571.1|BM349571
EST:     CTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18167723|gb|BM337563.1|BM337563
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18175183|gb|BM350571.1|BM350571
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCANAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|17930559|gb|BM267519.1|BM267519
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18172771|gb|BM348159.1|BM348159
EST:     GATTTTCCATCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGAAGCAAAGATG
genomic: GATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18171903|gb|BM347291.1|BM347291
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|211125173|gb|FL001723.1|FL001723
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|28986685|gb|CB351259.1|CB351259
EST:     CCTTCAAAACATTAATGGGTTCATG                         GTCGGATCAAAGTCTAAAGCTAGT-GAAATGCCAAAGCTGGAGCAAAAATG
genomic: CCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18176691|gb|BM351624.1|BM351624
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18169435|gb|BM339275.1|BM339275
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|17929873|gb|BM266833.1|BM266833
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18172604|gb|BM347986.1|BM347986
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18166908|gb|BM336747.1|BM336747
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18175513|gb|BM350798.1|BM350798
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18169205|gb|BM339045.1|BM339045
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|17931775|gb|BM268735.1|BM268735
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|67019720|gb|CO448469.1|CO448469
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTTGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|211208453|gb|FL456119.1|FL456119
EST:     TTGATTTTCC-TCAAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: TTGATTTTCCTTC-AAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18168734|gb|BM338574.1|BM338574
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18166166|gb|BM336005.1|BM336005
EST:     GATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: GATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|60341832|gb|DN208805.1|DN208805
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAG
EST: gi|18162832|gb|BM332671.1|BM332671
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|16920411|gb|BM074644.1|BM074644
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18171093|gb|BM340933.1|BM340933
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18170353|gb|BM340193.1|BM340193
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18163653|gb|BM333492.1|BM333492
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18165202|gb|BM335041.1|BM335041
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18167865|gb|BM337705.1|BM337705
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18176328|gb|BM351323.1|BM351323
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18166536|gb|BM336375.1|BM336375
EST:     CAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|28986057|gb|CB350947.1|CB350947
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18167008|gb|BM336841.1|BM336841
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18172698|gb|BM348086.1|BM348086
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18162441|gb|BM332280.1|BM332280
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18164905|gb|BM334744.1|BM334744
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|17931210|gb|BM268170.1|BM268170
EST:     CAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18171298|gb|BM341138.1|BM341138
EST:     CAGCGGCATATTCCTTTGATTATCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|16922379|gb|BM075554.1|BM075554
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18169417|gb|BM339257.1|BM339257
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|16920648|gb|BM074760.1|BM074760
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|17932047|gb|BM269007.1|BM269007
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18174934|gb|BM350322.1|BM350322
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18174539|gb|BM349927.1|BM349927
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|28986654|gb|CB351243.1|CB351243
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18175523|gb|BM350806.1|BM350806
EST:     GCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: GCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|28985666|gb|CB350753.1|CB350753
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|17930260|gb|BM267220.1|BM267220
EST:     CTCAGCGGCATATTCCTTT-ATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|17929872|gb|BM266832.1|BM266832
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|17931753|gb|BM268713.1|BM268713
EST:     AAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: AAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18175617|gb|BM350866.1|BM350866
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|78543900|gb|DV621398.1|DV621398
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18169989|gb|BM339829.1|BM339829
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18169319|gb|BM339159.1|BM339159
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|17929763|gb|BM266723.1|BM266723
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|17930296|gb|BM267256.1|BM267256
EST:     ACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: ACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18163949|gb|BM333788.1|BM333788
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18174186|gb|BM349574.1|BM349574
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18164208|gb|BM334047.1|BM334047
EST:     TCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCAATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGAT
genomic: TCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTC-ATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGAT
EST: gi|18168889|gb|BM338729.1|BM338729
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18171349|gb|BM341189.1|BM341189
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18164070|gb|BM333909.1|BM333909
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|16922711|gb|BM075703.1|BM075703
EST:     CCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18165793|gb|BM335632.1|BM335632
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18173072|gb|BM348460.1|BM348460
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18167875|gb|BM337715.1|BM337715
EST:     TTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: TTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18173445|gb|BM348833.1|BM348833
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18162035|gb|BM331874.1|BM331874
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18162605|gb|BM332444.1|BM332444
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18162556|gb|BM332395.1|BM332395
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18166744|gb|BM336583.1|BM336583
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAGAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|71430320|gb|DR811370.1|DR811370
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGTAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18171828|gb|BM341668.1|BM341668
EST:     CCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|16922395|gb|BM075561.1|BM075561
EST:     TTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: TTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|17930114|gb|BM267074.1|BM267074
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18170645|gb|BM340485.1|BM340485
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18175285|gb|BM350654.1|BM350654
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|16922264|gb|BM075498.1|BM075498
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|17930965|gb|BM267931.1|BM267931
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGATAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18167700|gb|BM337540.1|BM337540
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAACCATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|28986237|gb|CB351037.1|CB351037
EST:     ATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: ATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18171926|gb|BM347314.1|BM347314
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|16922917|gb|BM075909.1|BM075909
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18172456|gb|BM347844.1|BM347844
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18175821|gb|BM350997.1|BM350997
EST:     TACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: TACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|17929900|gb|BM266860.1|BM266860
EST:     CCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|16921588|gb|BM075209.1|BM075209
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18171371|gb|BM341211.1|BM341211
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|28986348|gb|CB351091.1|CB351091
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18173127|gb|BM348515.1|BM348515
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|17930224|gb|BM267184.1|BM267184
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18172495|gb|BM347883.1|BM347883
EST:     TCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: TCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|17930285|gb|BM267245.1|BM267245
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18164999|gb|BM334838.1|BM334838
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18166495|gb|BM336334.1|BM336334
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGAT
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATC-AAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGAT
EST: gi|18174817|gb|BM350205.1|BM350205
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|16922942|gb|BM075934.1|BM075934
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|16922260|gb|BM075497.1|BM075497
EST:     ACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: ACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18168850|gb|BM338690.1|BM338690
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18171995|gb|BM347383.1|BM347383
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18171746|gb|BM341586.1|BM341586
EST:     TTCCTTCAAAACATTACTGGGTTCAGG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: TTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18170492|gb|BM340332.1|BM340332
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|16921724|gb|BM075269.1|BM075269
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18176501|gb|BM351434.1|BM351434
EST:     TGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: TGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18167464|gb|BM337303.1|BM337303
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAGAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18175612|gb|BM350863.1|BM350863
EST:     CAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18174662|gb|BM350050.1|BM350050
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|17929653|gb|BM266613.1|BM266613
EST:     CCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18165380|gb|BM335219.1|BM335219
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18168325|gb|BM338165.1|BM338165
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18175236|gb|BM350624.1|BM350624
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18173183|gb|BM348571.1|BM348571
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGAAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|17929520|gb|BM266480.1|BM266480
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18169734|gb|BM339574.1|BM339574
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAGAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18172224|gb|BM347612.1|BM347612
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18173833|gb|BM349221.1|BM349221
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAAATGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18172648|gb|BM348036.1|BM348036
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18167721|gb|BM337561.1|BM337561
EST:     AAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: AAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18164072|gb|BM333911.1|BM333911
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18170518|gb|BM340358.1|BM340358
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|17931664|gb|BM268624.1|BM268624
EST:     CAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18175106|gb|BM350494.1|BM350494
EST:     CTTTGATTTTCCTTCAAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTTTGATTTTCCTTC-AAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18173035|gb|BM348423.1|BM348423
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18170536|gb|BM340382.1|BM340382
EST:     CTCAGCGGCATATTCCTTTGATTATCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18173281|gb|BM348669.1|BM348669
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|18171187|gb|BM341027.1|BM341027
EST:     CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|28986863|gb|CB351347.1|CB351347
EST:     AAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: AAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|17931446|gb|BM268406.1|BM268406
EST:     CAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: CAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|17930788|gb|BM267748.1|BM267748
EST:     TTTGATTTTCCTTCAAAACATTACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: TTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
EST: gi|17931706|gb|BM268666.1|BM268666
EST:     ACTGGGTTCATG                         GTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG
genomic: ACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 48 (upstream exon), 46 (downstream exon)
Score: 75

TTTGTTTACAGAGTCAGCGTTGAAGGGCTCCCACTTCATTGAATTGTGCGCTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATGGTCATGGCAGTTTCCTGTGCTAAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 513

TTTGTTTACAGAGTCAGCGTTGAAGGGCTCCCACTTCATTGAATTGTGCGCTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATGGTCATGGCAGTTTCCTGTGCTAAG


Block sizes: 49 (upstream exon), 46 (downstream exon)
Score: 275

TTTGTTTACAGAGTCAGCGTTGAAGGGCTCCCACTTCATTGAATTGTGCGCTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATGGTCATGGCAGTTTCCTGTGCTAAG


Block sizes: 49 (upstream exon), 46 (downstream exon)
Score: 123

TTTGTTTACAGAGTCAGCGTTGAAGGGCTCCCACTTCATTGAATTGTGCGCTCAGCGGCATATTCCTTTGATTTTCCTTCAAAACATTACTGGGTTCATGgtatggtatt ... actgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATGGTCATGGCAGTTTCCTGTGCTAAG




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aacttttgaaggacagtatcatgttcattgttgatttatctgctgactgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATGGTCATGGCAGTTTCCTGTGCTAAG
                                        tgctgac  putative branch site (score: 123)
                              ttgatttat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
atgcaaattagttaccttatcaagtatgactctatgagatgtttaaacttttgaaggacagtatcatgttcattgttgatttatctgctgactgctgtagGTCGGATCAAAGTCTGAAGCTAGTGGAATTGCCAAAGCTGGAGCAAAGATGGTCATGGCAGTTTCCTGTGCTAAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - catgttc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttgttga