1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gttagtttttaatctcattgtcttcatgttactttagacagttttgttgcaatttattggttaattcactcatatggccttgatgtcgtcgcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTGTTGTTGGTGGTGAAAG
species | Zea mays |
transcript | GRMZM2G540538_T02 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|9952767|gb|BE639350.1|BE639350
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211299293|gb|FK964182.1|FK964182
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: CAAGTTTGGTGAGGAAATGAAGAAAAACGCTNCA-GCTGCANGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|28361646|gb|CB240002.1|CB240002
genomic: CAAGTTTGGTGAGGAAATGAAGAAAAACGCT-CAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211406117|gb|FK964261.1|FK964261
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: CAAGTTTGGTGAGGAAATGAAGAAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211538004|gb|FL000878.1|FL000878
genomic: CAAGTTTGGTGAGGAAATGAAGAAAAA-CGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211534999|gb|FL000868.1|FL000868
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|19272533|gb|BM888789.1|BM888789
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|60358287|gb|DN225260.1|DN225260
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211295007|gb|FK964152.1|FK964152
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|28931167|gb|CB334528.1|CB334528
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211297153|gb|FK964172.1|FK964172
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTEST: gi|211299292|gb|FK964181.1|FK964181
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCT
EST: ACAAGNTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATEST: gi|211297154|gb|FK964173.1|FK964173
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTAT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211301432|gb|FK964199.1|FK964199
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|18654717|gb|BM499522.1|BM499522
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211538003|gb|FL000877.1|FL000877
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|60355538|gb|DN222511.1|DN222511
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211292867|gb|FK964139.1|FK964139
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|18649011|gb|BM497830.1|BM497830
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|30031919|gb|CB833770.1|CB833770
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211295014|gb|FK964159.1|FK964159
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGGTATGEST: gi|211403574|gb|FK964250.1|FK964250
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTG-TATG
EST: ACAAGTTTSGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211403570|gb|FK964246.1|FK964246
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|30087102|gb|CB885310.1|CB885310
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|5555550|gb|AI881501.1|AI881501
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211303575|gb|FK964215.1|FK964215
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTEST: gi|19351360|gb|BM895892.1|BM895892
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACT
EST: ACAAGTTTGGTGAGGAAATGAAGACAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|18649868|gb|BM498687.1|BM498687
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211401016|gb|FK964225.1|FK964225
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCEST: gi|211535006|gb|FL000875.1|FL000875
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGC
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211301430|gb|FK964197.1|FK964197
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGTCACATGTGCTGTATGTEST: gi|29543823|gb|CB604203.1|CB604203
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGGTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGEST: gi|211411224|gb|FK964285.1|FK964285
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGG
EST: ACAAGTTTGGTGAGGAAATGNNNNNNN-CGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTEST: gi|18649867|gb|BM498686.1|BM498686
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|26557766|gb|CA830001.1|CA830001
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTCGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACEST: gi|211403564|gb|FK964240.1|FK964240
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCAC
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211408681|gb|FK964276.1|FK964276
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|18384280|gb|BM417479.1|BM417479
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|20811213|gb|BQ295691.1|BQ295691
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211403575|gb|FK964251.1|FK964251
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211301429|gb|FK964196.1|FK964196
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|18654570|gb|BM499375.1|BM499375
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|18654716|gb|BM499521.1|BM499521
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|19436637|gb|BM953047.1|BM953047
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTEST: gi|211295005|gb|FK964150.1|FK964150
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATEST: gi|211406116|gb|FK964260.1|FK964260
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACAT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|26456972|gb|CA828555.1|CA828555
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211408679|gb|FK964274.1|FK964274
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211299298|gb|FK964187.1|FK964187
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211301441|gb|FK964208.1|FK964208
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|24773803|gb|CA409057.1|CA409057
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211401021|gb|FK964230.1|FK964230
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|28361834|gb|CB240190.1|CB240190
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211403569|gb|FK964245.1|FK964245
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|40335337|gb|CK369407.1|CK369407
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211403566|gb|FK964242.1|FK964242
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211295016|gb|FK964161.1|FK964161
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTNACT GCTCAYTTACTACGAGGATGAGACTGCTCCTACTGGCAEST: gi|211303574|gb|FK964214.1|FK964214
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCA-TTACTACGAGGATGAGACTGCTCCTACTGGCA
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|18384281|gb|BM417480.1|BM417480
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211299303|gb|FK964192.1|FK964192
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|24961588|gb|CA483591.1|CA483591
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211406111|gb|FK964255.1|FK964255
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211406118|gb|FK964262.1|FK964262
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|9953243|gb|BE639826.1|BE639826
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTEST: gi|211535002|gb|FL000871.1|FL000871
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
EST: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACT GCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
genomic: ACAAGTTTGGTGAGGAAATGAAGAAAAACGCTCAAGCTGCAGGAGTTACTgttagttttt ... gcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGT
gttgcaatttattggttaattcactcatatggccttgatgtcgtcgcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTGTTGTTGGTGGTGAAAG
aatttattggttaatt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gttagtttttaatctcattgtcttcatgttactttagacagttttgttgcaatttattggttaattcactcatatggccttgatgtcgtcgcatactcagGCTCATTACTACGAGGATGAGACTGCTCCTACTGGCACATGTGCTGTATGTGTTGTTGGTGGTGAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG