Skip to another splice site:
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...acagtttgctatgcacatattaatgacattttatatcagtctggttctaccatcctgtattatacaatgtattgactgaaatatgcttttgaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAGGGACTGGCATGAGTTTCCACAGTGGAAGCCCCAGGGTTTGGCACGTGTC

Basic information

species Zea mays
transcript GRMZM2G495626_T03
intron # 5
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G495626_T03 (Zea mays), 3'ss of exon 5
lower sequence: LOC_Os01g67160.1 (Oryza sativa), 3'ss of exon 5
--acagtttgctatgcacatattaatgacattttatatcagtctggttctaccatcctgtattatacaatg---tattgactgaaatatgcttttgaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAGGGACTGGCATGAGTTTCCACAGTGGAAGCCCCAGGGTTTGGCACGTGTC
  | ||| ||  ||     |      | |  | ||  | |   |  ||    ||    ||||||| || |     ||||||| |||    ||| | || |    ||||| ||||||| ||||||||||| |||||||||||||| | |||||| |||||||||||||||||||||||||||||||| |||  ||| | ||||   
gtatagtgtgtgata-gtttgcctcagcctgtataccttatggtaatttattcagggagtattatgcattaagccattgactaaaaccgacttcttaata----gGTTGTTGGGAACTCCTACTGAGGAGCAGTGGCCTGGAGTAACTGATTTGAGGGACTGGCATGAGTTTCCACAGTGGAAGCCACAGATTTTAGAACGTCAA

upper sequence: GRMZM2G495626_T03 (Zea mays), 3'ss of exon 5
lower sequence: Vv08s0056g00210.t01 (Vitis vinifera), 3'ss of exon 3
acagtttgctatgca-catattaatgacattttatatcagtctggttctaccatcctgtattatacaatgtattgactgaaatatgcttttgaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAGGGACTGGCATGAGTTTCCACAGTGGAAGCCCCAGGGTTTGGCACGTGTC
    | |  | || | | ||||  ||  | || || ||    ||   ||   ||  | |        |    || | |   || | || |     |||||||||| ||||||| || |||||| |||||||||||||||| |||  | | || ||||||||||  | |||||||||| | || ||    ||||||||||  
tgtatctattttgtatcctattcctg-taattcatgtccaaatgccactgtgattttcttcctcttgactctttcatttttattttctatcttggaaaaagGTTGTTGGGAACGCCAACTGAGAAACAGTGGCCTGGAGTTAGTTCTCTGAGAGACTGGCATGTCTATCCACAGTGGGAACCTCAAAACTTGGCACGTGCT
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|31558280|gb|CD527492.1|CD527492
EST:     GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|22935988|gb|BU572263.1|BU572263
EST:     GCTCTCTTTCCTGG-GACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|50328765|gb|CO523891.1|CO523891
EST:     GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|4967165|gb|AI691873.1|AI691873
EST:     GCTCTCTTTCCTGGT-ACTCGGAGTTGCAACAGTTGCTTCA-ATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|5081226|gb|AI738383.1|AI738383
EST:     TGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: TGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|71450236|gb|DR831286.1|DR831286
EST:     GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|18178648|gb|BM379858.1|BM379858
EST:     AGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: AGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|31558281|gb|CD527493.1|CD527493
EST:     GACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAG-GGCCTGGAGTGAGTGATTTAAG
genomic: GACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|29577107|gb|CB617219.1|CB617219
EST:     GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|213167909|gb|FM191321.1|FM191321
EST:     GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|78027249|gb|DV495636.1|DV495636
EST:     GGTGACTTGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: GGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|71313275|gb|DR793171.1|DR793171
EST:     GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|60343112|gb|DN210085.1|DN210085
EST:     GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|71450237|gb|DR831287.1|DR831287
EST:     GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAA
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAA
EST: gi|29947506|gb|CB816691.1|CB816691
EST:     GCTCTCTTTCCTGG-GACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAG-GGCCTGGAGTGAGTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|9254753|gb|BE345221.1|BE345221
EST:     CCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: CCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|211301653|gb|FL434049.1|FL434049
EST:     GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|74238746|gb|DT646660.1|DT646660
EST:     GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGAAGTGAGTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|110195341|gb|EC877238.1|EC877238
EST:     GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|30306650|gb|CD001323.1|CD001323
EST:     GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|76294289|gb|DV033857.1|DV033857
EST:     GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTTAG                         GTTGGCTGGGAACACCTACTGAAGAACAGTGGGCCTGGAGT
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTG-CTGGGAACACCTACTGAGGAACAGTGG-CCTGGAGT
EST: gi|71431608|gb|DR812658.1|DR812658
EST:     GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGATTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|50336412|gb|CO531538.1|CO531538
EST:     GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|91878647|gb|EB408604.1|EB408604
EST:     GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|88755349|gb|DY539490.1|DY539490
EST:     GCTTTCTTTCTTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|149110995|gb|EE294494.2|EE294494
EST:     GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|5005601|gb|AI711663.1|AI711663
EST:     GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|211362664|gb|FL128442.1|FL128442
EST:     GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACA
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACA
EST: gi|91873993|gb|EB403950.1|EB403950
EST:     GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|76908586|gb|DV163013.1|DV163013
EST:     GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|76289583|gb|DV029151.1|DV029151
EST:     GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
EST: gi|87155782|gb|DY400571.1|DY400571
EST:     GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG                         GTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG
genomic: GCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 48 (downstream exon)
Score: 159

CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAGGGACTGGCATGAGTTTCCACAGTGGAAGCCCCAGGGTTTGGCACGTGTC


Block sizes: 48 (upstream exon), 40 (downstream exon)
Score: 19

CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAGGGACTGGCATGAGTTTCCACAGTGGAAGCCCCAGGGTTTGGCACGTGTC


Block sizes: 48 (upstream exon), 42 (downstream exon)
Score: 28

CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAGGGACTGGCATGAGTTTCCACAGTGGAAGCCCCAGGGTTTGGCACGTGTC


Block sizes: 49 (upstream exon), 45 (downstream exon)
Score: 14

CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAGgtccttttct ... gaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAGGGACTGGCATGAGTTTCCACAGTGGAAGCCCCAGGGTTTGGCACGTGTC




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tctaccatcctgtattatacaatgtattgactgaaatatgcttttgaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAGGGACTGGCATGAGTTTCCACAGTGGAAGCCCCAGGGTTTGGCACGTGTC
                        tattgac  putative branch site (score: 14)
                                 aaatatgcttttgaaa  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
acagtttgctatgcacatattaatgacattttatatcagtctggttctaccatcctgtattatacaatgtattgactgaaatatgcttttgaaaaaaaagGTTGCTGGGAACACCTACTGAGGAACAGTGGCCTGGAGTGAGTGATTTAAGGGACTGGCATGAGTTTCCACAGTGGAAGCCCCAGGGTTTGGCACGTGTC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGAAG
- - - - -tatgcac
- - - - - - - - - - - -tgacatt
- - - - - - - - - - - - - - - - - - - - - - - - - - -cctgtat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgtattg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tatgctt