Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagtgatcctctggtctttattgcatctatgccttaagaattgttcctgttgtgtttacatctaatgaacattttagaatgtaagtcgaaggagttggttctaacacgttgtgatgtatgcatcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTCTAAGTCTGTTTTTTTGTGAAGTCTGCTCTTTATGATATTTGGTTTTTGA

Basic information

species Zea mays
transcript GRMZM2G181194_T01
intron # 5
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G181194_T02 (Zea mays), 3'ss of exon 2
lower sequence: LOC_Os08g44450.3 (Oryza sativa), 3'ss of exon 2
gtgagtgatcc--tctggtctttattgcatctatgc---cttaagaattgttcctgtt----------gtgtttacatctaa----tgaacat-tttagaatgtaagtc------gaaggagttggttctaacacgttgtgat-gtatgcatcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTCTAAGTCTGTTTTTTTGTGAAGTCTGCTCTTTATGATATTTGGTTTTTGA----
|||||| |||   ||||  | |  ||||||  |      ||||    |     |||||          |||  || || | |    ||  | |  || ||||   |||       ||   |     |  | | |  |||  || || ||  | |   |||| || || || ||||||||||||||||||||||||||| ||||| | ||||||||  || | ||        ||     | |  |   |  |||         
gtgagttatctgttctgagcctgtttgcatgcaattaaacttacagctcaaatctgtttaacaacatagtgaatatatatgagttttggccttgctttgaataatagttttatgtgagaaaacaactgatgataacttggaattgtttgtgtttgatagGTGAGGTGCCTTTACATCAAGAGCACCATGGGGAAACCAATCAGGGTGTTCTAAGTTGGTGTGTTCC----ACCTAGAAGTGAAAAGGATCAGTTGAAACCAAG

upper sequence: GRMZM2G181194_T02 (Zea mays), 3'ss of exon 2
lower sequence: LOC_Os08g44450.1 (Oryza sativa), 3'ss of exon 4
--------------------------gtgagtgatcctctggtctttattgcatctatgccttaagaattgttcctg----ttgtgtttacatctaatgaacattttagaatgtaagtcgaaggagttggttctaacacgttgtgatgtatgcatcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTCTAAGTC----TGTTTTTTTGTGAAGT---CTGCTCTTTATGATATTTGGTTTTTGA
                          |  | | | | |   |     ||    |  |   | ||   | | |   ||    |||   || | |  ||| |   |||||   ||| ||   ||  |  || |  ||||  |   |  ||| ||  | |   |||| || || || ||||||||||||||||||||||||||| ||||| | ||||||||     ||||       |||||     |       ||| |    | ||||  
gttatctgttctgagcctgtttgcatgcaattaaacttacagctcaaatctgtttaacaacatagtgaatatatatgagttttggccttgctttgaataatagtttta---tgtgag--aaaacaactgatgataacttggaat--tgtttgtgtttgataggtgagGTGCCTTTACATCAAGAGCACCATGGGGAAACCAATCAGGGTGTTCTAAGTTGGTGTGTTCCACCTAGAAGTGAAAAGGATCAGTTGAAACCAAGCTTTT--
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|5713971|gb|AI943956.1|AI943956
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|211268446|gb|FL141046.1|FL141046
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGATCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|32943776|gb|CF048595.1|CF048595
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|32841275|gb|CD980956.1|CD980956
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|50325315|gb|CO520441.1|CO520441
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCA
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCA
EST: gi|32930778|gb|CF035590.1|CF035590
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|60347511|gb|DN214484.1|DN214484
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|211379030|gb|FL141076.1|FL141076
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|76010849|gb|DT938019.1|DT938019
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|60347816|gb|DN214789.1|DN214789
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|76010850|gb|DT938020.1|DT938020
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|67015735|gb|CO444484.1|CO444484
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGNGGAAACCATTCAGGATTTT
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGG-GGAAACCATTCAGGATTTT
EST: gi|67021308|gb|CO450057.1|CO450057
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|32841237|gb|CD980918.1|CD980918
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|19769382|gb|BQ034103.1|BQ034103
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|6020458|gb|AW065386.1|AW065386
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|37396886|gb|CF635737.1|CF635737
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|84980587|gb|DW530936.1|DW530936
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|166474714|gb|EG122102.1|EG122102
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTC
EST: gi|84977553|gb|DW475975.1|DW475975
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|211266012|gb|FL141033.1|FL141033
EST:     ATGAGCATNCA-CTTCCTCGTGTCTCTTTCTGAGGAAGAACTGGCAGAAT                         GTAAAATGTCTCTACATCAAAAGC-CCATGGGGGAAACC
genomic: ATGAGCAT-CAACTTCCTCGTGTCTCTT-CTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGG-AAACC
EST: gi|211107003|gb|FL459237.1|FL459237
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|60394592|gb|DN227462.1|DN227462
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|71323607|gb|DR798478.1|DR798478
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|211263568|gb|FL141014.1|FL141014
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|60351553|gb|DN218526.1|DN218526
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|6865330|gb|AW360680.1|AW360680
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|60345300|gb|DN212273.1|DN212273
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|60357767|gb|DN224740.1|DN224740
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|60339663|gb|DN206636.1|DN206636
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|60347533|gb|DN214506.1|DN214506
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|19821797|gb|BQ047821.1|BQ047821
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGG
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGG
EST: gi|67016173|gb|CO444922.1|CO444922
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGGAAACCATTCAGGATTTT
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGG-AAACCATTCAGGATTTT
EST: gi|71323606|gb|DR798477.1|DR798477
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTTTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTTTACATCAAGAGCCCCATGGGGAAACCATTCAGGATTTTT
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|32934673|gb|CF039485.1|CF039485
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|33093601|gb|CF053595.1|CF053595
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|32930672|gb|CF035484.1|CF035484
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|211242318|gb|FL469539.1|FL469539
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|5018419|gb|AI714612.1|AI714612
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|15323558|gb|BI478780.1|BI478780
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|60396150|gb|DN229019.1|DN229019
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|60358826|gb|DN225799.1|DN225799
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|91875746|gb|EB405703.1|EB405703
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|71430187|gb|DR811237.1|DR811237
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
EST: gi|84980668|gb|DW531017.1|DW531017
EST:     AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAAT                         GTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC
genomic: AGATGAGCATCAACTTCCTCGTGTCTCTTCTGAAGAAGAACTGGCAGAATgtgagtgatc ... catcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

agaatgtaagtcgaaggagttggttctaacacgttgtgatgtatgcatcttgcagGTAAGATGTCTCTACATCAAGAGCACCATGGGGAAACCATTCAGGATTTTCTAAGTCTGTTTTTTTGTGAAGTCTGCTCTTTATGATATTTGGTTTTTGA
                       ttctaac  putative branch site (score: 1)