1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
...taaatgtttttacagctatgtttttttacccatgacttttgctggtataaaataccggttctagactgtcaacaatttctcacagtatttccattgccagGGTCTTTTGCTGGTCTTGGATTTTTGTCACTCTACCTGTCAGGCAAAATTAAGGCCTTCAATCGCCAAGGTCACGTGGCCAAACTTTGCATAGTGATCCT
species | Zea mays |
transcript | GRMZM2G174343_T01 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: ATGGGCGCAAGAGCTTTCCTAGTGGCCACACTTCGTGTAAGTTTGCACTA GGTCTTTTGCTGGTCTTGGATTTTTGTCACTCTACCTGTCAGGCAAAATTAEST: gi|71326098|gb|DR799728.1|DR799728
genomic: ATGGGCGCAAGAGCTTTCCTAGTGGCCACACTTCGTGTAAGTTTGCACTAgtaagtgctc ... ccattgccagGGTCTTTTGCTGGTCTTGGATTTTTGTCACTCTACCTGTCAGGCAAAATTA
EST: ATGGGCGCAAGAGCTTTCCTAGTGGCCACACTTC----------G---T- GGTCTTTTGCTGGTCTTGGATTTTTGTCACTCTACCTGTCAGGCAAAATTA
genomic: ATGGGCGCAAGAGCTTTCCTAGTGGCCACACTTCGTGTAAGTTTGCACTAgtaagtgctc ... ccattgccagGGTCTTTTGCTGGTCTTGGATTTTTGTCACTCTACCTGTCAGGCAAAATTA
tataaaataccggttctagactgtcaacaatttctcacagtatttccattgccagGGTCTTTTGCTGGTCTTGGATTTTTGTCACTCTACCTGTCAGGCAAAATTAAGGCCTTCAATCGCCAAGGTCACGTGGCCAAACTTTGCATAGTGATCCT
ttctcac putative branch site (score: 2)
tttccatt putative PPT
aacaattt TA-rich tract