1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
...gtttggtcacaagcgattgatgcggctgtttgactttattttcatcgtggattccatgactctggttgtaataacatttgtctttatatttcttttgcagCGACAAGCTGTTGCAGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAGATCAGGGCACGGCTTGCTAAAGTGAGGTCGTAAATCATATACATATCTG
species | Zea mays |
transcript | GRMZM2G165195_T05 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: CCAGAACACAGAAGATACATGAGGCTTCAACAAGCAGGGTTCCAGAAGAG CGACAAGCTGTTGCAGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAGEST: gi|76010550|gb|DT937720.1|DT937720
genomic: CCAGAACACAGAAGATACATGAGGCTTCAACAAGCAGGGTTCCAGAAGAAgtaactaact ... tcttttgcagCGACAAGCTGTTGCAGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAG
EST: CCAGAACACAGAAGATACATGAGGCTTCAACAAGCAGGGTTCCAGAAGAA CGACAAGCTGTTGCAGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAGEST: gi|211298305|gb|FL473376.1|FL473376
genomic: CCAGAACACAGAAGATACATGAGGCTTCAACAAGCAGGGTTCCAGAAGAAgtaactaact ... tcttttgcagCGACAAGCTGTTGCAGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAG
EST: CCAGAACACAGAAGATACATGAGGCTTCAACAAGCAGGGTTCCAGAAGAA CGACAAGCTGTTGCAGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAGEST: gi|13558970|gb|BG550325.1|BG550325
genomic: CCAGAACACAGAAGATACATGAGGCTTCAACAAGCAGGGTTCCAGAAGAAgtaactaact ... tcttttgcagCGACAAGCTGTTGCAGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAG
EST: CCAGAACACAGAAGATACATGAGGCTTCAACAAGCAGGGTTCCAGAAGAA CGACAAGCTGTTGCAGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAGEST: gi|71765371|gb|DR963308.1|DR963308
genomic: CCAGAACACAGAAGATACATGAGGCTTCAACAAGCAGGGTTCCAGAAGAAgtaactaact ... tcttttgcagCGACAAGCTGTTGCAGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAG
EST: CCAGAACACAGAAGATACATGAGGCTTCAACAAGCAGGGTTCCAGAAGAA CGACAAGCTGTTGCAGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAGEST: gi|32867970|gb|CF007652.1|CF007652
genomic: CCAGAACACAGAAGATACATGAGGCTTCAACAAGCAGGGTTCCAGAAGAAgtaactaact ... tcttttgcagCGACAAGCTGTTGCAGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAG
EST: CCAGAACACAGAAGATACATGAGGCTTCAACAAGCAGGGTTCCAGAAGAG CGACAAGCTGTTGCTGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAGEST: gi|78074982|gb|DV503416.1|DV503416
genomic: CCAGAACACAGAAGATACATGAGGCTTCAACAAGCAGGGTTCCAGAAGAAgtaactaact ... tcttttgcagCGACAAGCTGTTGCAGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAG
EST: CCAGAACACAGAAGATACATGAGGCTTCAACAAGCAGGGTTCCAGAAGAA CGACAAGCTGTTGCAGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAGEST: gi|76281952|gb|DV021520.1|DV021520
genomic: CCAGAACACAGAAGATACATGAGGCTTCAACAAGCAGGGTTCCAGAAGAAgtaactaact ... tcttttgcagCGACAAGCTGTTGCAGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAG
EST: CCAGAACACAGAAGATACATGAGGCTTCAACAAGCAGGGTTCCAGAAGAA CGACAAGCTGTTGCAGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAGEST: gi|32867969|gb|CF007651.1|CF007651
genomic: CCAGAACACAGAAGATACATGAGGCTTCAACAAGCAGGGTTCCAGAAGAAgtaactaact ... tcttttgcagCGACAAGCTGTTGCAGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAG
EST: CCAGAACACAGAAGATACATGAGGCTTCAACAAGCAGGGTTCCAGAAGAG CGACAAGCTGTTGCTGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAGEST: gi|211095886|gb|FL432128.1|FL432128
genomic: CCAGAACACAGAAGATACATGAGGCTTCAACAAGCAGGGTTCCAGAAGAAgtaactaact ... tcttttgcagCGACAAGCTGTTGCAGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAG
EST: CCAGAACACAGAAGATACATGAGGCTTCAACAAGCAGGGTTCCAGAAGAA CGACAAGCTGTTGCAGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAGEST: gi|76933730|gb|DV173563.1|DV173563
genomic: CCAGAACACAGAAGATACATGAGGCTTCAACAAGCAGGGTTCCAGAAGAAgtaactaact ... tcttttgcagCGACAAGCTGTTGCAGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAG
EST: CCAGAACACAGAAGATACATGAGGCTTCAACAAGCAGGGTTCCAGAAGAA CGACAAGCTGTTGCAGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAG
genomic: CCAGAACACAGAAGATACATGAGGCTTCAACAAGCAGGGTTCCAGAAGAAgtaactaact ... tcttttgcagCGACAAGCTGTTGCAGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAG
cgtggattccatgactctggttgtaataacatttgtctttatatttcttttgcagCGACAAGCTGTTGCAGAGGGTGCTGATGACGACGAGGAAGACCTAGAAGAGATCAGGGCACGGCTTGCTAAAGTGAGGTCGTAAATCATATACATATCTG
taataac putative branch site (score: 1)
tctttatatttctttt putative PPT
taataacatttgtctt TA-rich tract