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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatatatcttctgtttgttaccatgatattatattggtgtcattgtttgtatttagcccatcaagaataatcattttttcatgtgcttgctgtaagagtcatctcttgttgtggtgaacgatttcccatctctctagcccctttaacgtttgttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCTGGATTCAAGAAGGACGACAAGCAGTTGGATGCTGATACCCACCGCAGGT

Basic information

species Zea mays
transcript GRMZM2G163081_T05
intron # 5
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G163081_T04 (Zea mays), 3'ss of exon 6
lower sequence: LOC_Os01g67134.1 (Oryza sativa), 3'ss of exon 6
gtatat-atcttctgtttgttaccat--gatattatattggtgtcattgtttgtatttagcccatcaagaataatcattttttcatgtgc-ttgctgtaagagtcatctcttgttgtggtgaacgat-ttcccatctc-tctagcccctttaacgtttgttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCTGGATTCAAGAAGGACGACAAGCAGTTGGATGCTGATACCCACCGCAGGT
|| | |  |  | || | |  ||  |  | |  | || |  |    |  ||| |   | |  ||||||          | ||| |    |    | || |   | | || | | | || ||| |  | ||   | ||| | | |      |    |||  | | ||||||||| |||||||| || || || ||||||||||| || |||||||||||||| |||||||||||||| |||||| | ||| ||||||  ||||||| ||
gtgtgttgtgctttgatcgcaactgttggctgctgtaataatagt-tgatttatcacttgaacatcaaattcctcagctcttttagaaacacaaccgttacgataacctttggat-tgttgatctgtattagtagctcatgtggatatacttctcttttcttctgcagGGAGCTTTGGATGGTGGTCTTGACATTCCTCACAGTGACAAGAGGTTTGCTGGGTTCAAGAAGGACGAGAAGCAGCTTGATTCTGATATTCACCGCAAGT

upper sequence: GRMZM2G163081_T04 (Zea mays), 3'ss of exon 6
lower sequence: LOC_Os01g67126.1 (Oryza sativa), 3'ss of exon 6
gtatat-atcttctgtttgttaccat--gatattatattggtgtcattgtttgtatttagcccatcaagaataatcattttttcatgtgc-ttgctgtaagagtcatctcttgttgtggtgaacgat-ttcccatctctctagcccctttaacgtttgttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCTGGATTCAAGAAGGACGACAAGCAGTTGGATGCTGATACCCACCGCAGGT
|| | |  |  | || |    ||  |  | |  | || |  |    |  |||||   | |  ||||||    |     | ||| |    |    | || |   | | || | | | || ||| |  | ||   | |||    |    |    |  || || | ||||||||| |||||||| || || || ||||||||||| || |||||||||||||| |||||||||||||| |||||| | ||| ||||||  ||||||| ||
gtgtgttgtgctttgatctcaactgttggctgctgtaataatagt-tgatttgtcacttgaacatcaaattcatcagctcttttagaaacacaaccgtcaatataacctttggat-tgttgatctgtattagtagctcatgtggatatacttctcttctt-ctgcagGGAGCTTTGGATGGTGGTCTTGACATTCCTCACAGTGACAAGAGGTTTGCTGGGTTCAAGAAGGACGAGAAGCAGCTTGATTCTGATATTCACCGCAAGT

upper sequence: GRMZM2G163081_T04 (Zea mays), 3'ss of exon 6
lower sequence: GLYMA07G06590.1 (Glycine max), 3'ss of exon 6
gtatatatcttctgtttgttaccatgatattatattggtgtcattgtttgtatttagcccatcaagaataatcattttttcatgtgcttgctgtaagagtcatctcttgttgtggtgaacgatttcccatctctctagcccctttaacgtttgttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCTGGATTCAAGAAGGACGACAAGCAGTTGGATGCTGATACCCACCGCAGGT
                                                                    |||||  |  | | |||  |     | || || ||   ||||| |  ||   |||   | |  |   ||  |        | |||||    ||||||||  ||||||| ||  |||||||||||||||| || |||||||||||||| ||  | |||||  | ||| || | ||||| ||    || || |  |
-------------------------------------------------------------------gtaatctatcatac-tgtaatgttaatcagtgtgatt--ttgttttaatggttgat---caaattgaataatct-----gtgattgtt--tacagGGAGCTCTGGATGGGGGGTTGGATATTCCTCACAGTGACAAGAGGTTTGCTGGGTTTGATAAGGAGAAGAAGGAGCTTGATGCAGAGGTTCATCGGAAAT

upper sequence: GRMZM2G163081_T04 (Zea mays), 3'ss of exon 6
lower sequence: GLYMA07G06580.1 (Glycine max), 3'ss of exon 6
gtatatatcttctgtttgttaccatgatattatattggtgtcattgtttgtatttagcccatcaagaataatcattttttcatgtgcttgctgtaagagtcatctcttgttgtggtgaacgatttcccatctctctagcccctttaacgtttgttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCTGGATTCAAGAAGGACGACAAGCAGTTGGATGCTGATACCCACCGCAGGT
                                                                    |||||  |  | | |||  |     | || || || | || |  ||||  |  |      |  |   ||  |        | |||||    ||||||||  ||||||| ||  |||||||||||||||| || |||||||||||||| ||  | |||||  | ||| || | ||||||||    || ||||  |
-------------------------------------------------------------------gtaatctatcatgc-tgtaatgttaatcagtgtgattttttttaatggttgatca------aattgaataatct-----gtgattgtt--tacagGGAGCTCTGGATGGGGGGTTGGATATTCCTCACAGTGATAAGAGGTTTGCTGGGTTTGATAAGGAAAAGAAGGAGCTTGATGCTGAGGTTCATCGCAAAT

upper sequence: GRMZM2G163081_T04 (Zea mays), 3'ss of exon 6
lower sequence: GLYMA13G35580.2 (Glycine max), 3'ss of exon 6
gtatatatcttctgtttgttaccatgatattatattggtgtcattgtttgtatttagcccatcaagaataatcattttttcatgtgcttgctgtaagagt-catctcttgttgtggtgaacgatttcccatctctctagcccctttaacgtttgttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCTGGATTCAAGAAGGACGACAAGCAGTTGGATGCTGATACCCACCGCAGGT
                                                                                     |    || ||| | | || |||||| | || |    | |||        || |  |   | |  ||         ||||||||  ||||||| ||  ||||||||||||||||||| |||||||||||||| ||  | |||||  | ||| || | ||||||||    || ||||  |
-------------------------------------------------------------------------------------gtaatctctaatactgcaactcttggtatgattt-tgttttagtggtggtcaaatctaataattgtgatggtttacagGGAGCTCTGGATGGGGGTTTGGATATTCCTCACAGCGACAAGAGGTTTGCTGGGTTTGATAAGGAGAAGAAGGAGCTTGATGCTGAGGTTCATCGCAAAT

upper sequence: GRMZM2G163081_T04 (Zea mays), 3'ss of exon 6
lower sequence: Vv04s0008g00050.t01 (Vitis vinifera), 3'ss of exon 1
gtatatatcttctgtttgttaccatgatattatattggtgtcattgtttgtatttagcccatcaagaataatcattttttcatgtgcttgctgtaagagtcatctcttgttgtggtgaacgatttcccatctctctagcccctttaacgtttgttgcc--gcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCTGGATTCAAGAAGGACGACAAGCAGTTGGATGCTGATACCCACCGCAGGT
                                                                                                      ||| |  |  || || ||   |    |   |    | |  |     ||||| |||   | |||||||||||||||| ||| |||| ||||||||||| || ||||| |||  |||||||   || ||   ||||||| | ||||| ||    ||||| | ||
---------------------------------------------------------------------------------------------------gtgtctttcttaatgttggacttctgagaacaacaactggcaatcgtgtgtttggtgctctgaagGGAGCATTGGATGGTGGCTTGGACATTCCTCACAGTGACAAGAGATTTTTTGGATTCTCAAATGATAGCAAGCAGCTTGATGCCGAGGTTCACCGAAAGT

upper sequence: GRMZM2G163081_T04 (Zea mays), 3'ss of exon 6
lower sequence: Vv05s0094g00870.t01 (Vitis vinifera), 3'ss of exon 6
gtatatatcttctgtttgttaccatgatattatattggtgtcattgtttgtatttagcccatcaagaataatcattttttcatgtgcttgctgtaagagtcatctcttgttgtggtgaacgatttcccatctctctagcccctttaacgtttgttg-ccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCTGGATTCAAGAAGGACGACAAGCAGTTGGATGCTGATACCCACCGCAGGT
                                                             |  |  |   ||  ||  | |  |||||| | |  |    || | |  ||| |   |   ||| || | ||    ||  | |||||  |   ||  |  ||||||||| ||||||| ||| |||| ||||||||||| || ||||| ||||||||||||   |||||   ||||||| | ||||| ||    || || | ||
-------------------------------------------------------------tacactactgtccattcatgacatgcttgtttttggttgaatgtttacttgagtctacttattcccaagcta--gaggtcatttaatttcaattaactacagGGAGCACTGGATGGTGGCTTGGACATTCCTCACAGTGACAAGAGATTTGCTGGATTCTCAAAGGATAGCAAGCAGCTTGATGCCGAGGTTCATCGAAAGT

upper sequence: GRMZM2G163081_T04 (Zea mays), 3'ss of exon 6
lower sequence: Vv00s0174g00190.t01 (Vitis vinifera), 3'ss of exon 6
gtatatatcttctgtttgttaccatgatattatattggtgtcattgtttgtatttagcccatcaagaataatcattttttcatgtgcttgct-gtaagagtcatctcttgttgtggtgaacgatttcccatctctctagcccctttaacgtttgttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCTGGATTCAAGAAGGACGACAAGCAGTTGGATGCTGATACCCACCGCAGGT----
                                                       |    ||     || ||  |||  |  ||   ||||   |   |  ||||||||    |  ||| |   |   ||  |  ||    ||| | |            ||||||||||||||||| || || |||||||||||||| || |||||||||||||||||||  | ||| |  |||||  | |||||||||   ||||||| ||    
-------------------------------------------------------aaatgattccagatgattctttaattttgaatttgcccattcaaaccatctctt--catcttgagc--ctcagcagttacctgtttcctctta--------attccagggagCATTGGATGGTGGACTTGATATTCCTCACAGTGACAAGAGGTTTGCTGGATTCAGCAGGGATGGTAAGCAACTTGATGCTGATGTTCACCGCAAGTATAT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|8665953|gb|BE186769.1|BE186769
EST:     CGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: CGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|91050472|gb|EB160890.1|EB160890
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60399243|gb|DN232057.1|DN232057
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|26559987|gb|CA832222.1|CA832222
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60353456|gb|DN220429.1|DN220429
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60343125|gb|DN210098.1|DN210098
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|5917501|gb|AW054304.1|AW054304
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|31998067|gb|CD661903.1|CD661903
EST:     CTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: CTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|4827633|gb|AI668325.1|AI668325
EST:     TTGGCCTTATCAGGACT-CANCAGGG-ACC-TGTTTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|67038759|gb|CO465014.1|CO465014
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|24773980|gb|CA409234.1|CA409234
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|20802664|gb|BQ293714.1|BQ293714
EST:     GCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: GCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|37386044|gb|CF630194.1|CF630194
EST:     CAGGACTACAACAGGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: CAGGACTACAACA-GGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|20336998|gb|BQ172628.1|BQ172628
EST:     TTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|166467315|gb|EG188283.1|EG188283
EST:     GAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: GAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|31356600|gb|CD440957.1|CD440957
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60342916|gb|DN209889.1|DN209889
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|26557726|gb|CA829961.1|CA829961
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|31353479|gb|CD437836.1|CD437836
EST:     T-GCCTTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATCCTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TGGCC-TTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60342387|gb|DN209360.1|DN209360
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60341860|gb|DN208833.1|DN208833
EST:     TGGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|31357768|gb|CD442125.1|CD442125
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60342189|gb|DN209162.1|DN209162
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60337333|gb|DN204306.1|DN204306
EST:     ACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: ACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60399132|gb|DN231946.1|DN231946
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60358170|gb|DN225143.1|DN225143
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCTTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|24773998|gb|CA409252.1|CA409252
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGCGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|31364028|gb|CD448383.1|CD448383
EST:     -TGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60344769|gb|DN211742.1|DN211742
EST:     GTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: GTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|71766224|gb|DR964161.1|DR964161
EST:     AGGGAACCGTGTCTTTGGTGCCTTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: AGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60341012|gb|DN207985.1|DN207985
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60400221|gb|DN233028.1|DN233028
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|5124416|gb|AI746152.1|AI746152
EST:     GTGT-TTTGGTG-CCTCAA-                         GGAGCATTGGATGNAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: GTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|31357392|gb|CD441749.1|CD441749
EST:     TTGACCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|32799227|gb|CD951463.1|CD951463
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCTTTGGATGGGGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|5928968|gb|AW056260.1|AW056260
EST:     TTGGCCTTATCAGGACTNCANCAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60337339|gb|DN204312.1|DN204312
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|24768128|gb|CA403257.1|CA403257
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60359414|gb|DN226387.1|DN226387
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|31360177|gb|CD444534.1|CD444534
EST:     GTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|32804182|gb|CD956418.1|CD956418
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCTTTGGATGGGGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|6601641|gb|AW256037.1|AW256037
EST:     AGGGAACCGTGTCTTTGGGGCCCTCAAG                         GGAGCATTGGATGNAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: AGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|31362415|gb|CD446772.1|CD446772
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60395058|gb|DN227927.1|DN227927
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|5919453|gb|AW054550.1|AW054550
EST:     GTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCAAGAAGAGGTTTGCT
genomic: GTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60347068|gb|DN214041.1|DN214041
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60351619|gb|DN218592.1|DN218592
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60350199|gb|DN217172.1|DN217172
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60347383|gb|DN214356.1|DN214356
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60398359|gb|DN231175.1|DN231175
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|78025344|gb|DV493731.1|DV493731
EST:     CTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: CTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|31910993|gb|CD651702.1|CD651702
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60398603|gb|DN231419.1|DN231419
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|6012680|gb|AW062117.1|AW062117
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|32929950|gb|CF034762.1|CF034762
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCTTTGGATGGGGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60394992|gb|DN227861.1|DN227861
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|31352906|gb|CD437263.1|CD437263
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60356734|gb|DN223707.1|DN223707
EST:     AGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: AGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60398485|gb|DN231301.1|DN231301
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60345281|gb|DN212254.1|DN212254
EST:     TTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60341797|gb|DN208770.1|DN208770
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|31352489|gb|CD436846.1|CD436846
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60347064|gb|DN214037.1|DN214037
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60336923|gb|DN203896.1|DN203896
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60352264|gb|DN219237.1|DN219237
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|67042510|gb|CO468765.1|CO468765
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|31441038|gb|CD510469.1|CD510469
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|29130026|gb|CB380730.1|CB380730
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60348846|gb|DN215819.1|DN215819
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|60358143|gb|DN225116.1|DN225116
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|5124536|gb|AI746272.1|AI746272
EST:     AGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: AGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|211413275|gb|FL046453.1|FL046453
EST:     TGGCCTTATCAGGACTACAACAGGGAAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCTTTGGATGGGGGCCTGGATATTCC
genomic: TGGCCTTATCAGGACTACAACAGGGAA-CCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCC
EST: gi|60344168|gb|DN211141.1|DN211141
EST:     AACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: AACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|67011087|gb|CO439836.1|CO439836
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
EST: gi|83279181|gb|DV943189.1|DV943189
EST:     TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAG                         GGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT
genomic: TTGGCCTTATCAGGACTACAACAGGGAACCGTGTCTTTGGTGCCCTCAAGgtatatatct ... gttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgttgtggtgaacgatttcccatctctctagcccctttaacgtttgttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCTGGATTCAAGAAGGACGACAAGCAGTTGGATGCTGATACCCACCGCAGGT
                                  ctttaac  putative branch site (score: 3)
                                   tttaa  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtatatatcttctgtttgttaccatgatattatattggtgtcattgtttgtatttagcccatcaagaataatcattttttcatgtgcttgctgtaagagtcatctcttgttgtggtgaacgatttcccatctctctagcccctttaacgtttgttgccgcagGGAGCATTGGATGGAGGCCTGGATATTCCTCACAGCGAGAAGAGGTTTGCTGGATTCAAGAAGGACGACAAGCAGTTGGATGCTGATACCCACCGCAGGT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCTGAT