1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtatacaatacaactcaaagcaagcaagcatcagcgccgtcgttgtcttcacaagttctatgagaaggaacggatcggagccttccagagtaacgtacggttcttccatggcatttggtttaatttccagGCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACACATCAGCAGCAGAGACAG
species | Zea mays |
transcript | GRMZM2G152477_T01 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: ACTGCAGCTACTGCTTCCAGTCCTCCAG GCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACACEST: gi|148966045|gb|EE016979.2|EE016979
genomic: ACTGCAGCTACTGCTTCCAGTCCTCCAGgtatacaata ... taatttccagGCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACAC
EST: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAG GCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACACEST: gi|16927228|gb|BM080297.1|BM080297
genomic: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAGgtatacaata ... taatttccagGCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACAC
EST: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAG GCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACACEST: gi|76289549|gb|DV029117.1|DV029117
genomic: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAGgtatacaata ... taatttccagGCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACAC
EST: TCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCCAG GCCA-CGGCGTCGATTTCTACATCAACGGGCATGACEST: gi|32845008|gb|CD984689.1|CD984689
genomic: TCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCC-AGgtatacaata ... taatttccagGCCAACGGCGTCGATTTCTACATCAACGGGCATGAC
EST: ATCATGGTGACGCCAAGGAGCTAGTGCAGCTACTGCTTCCAGTCCTACAG GCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACACEST: gi|74239383|gb|DT647297.1|DT647297
genomic: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAGgtatacaata ... taatttccagGCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACAC
EST: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAG CCCA-CGGCGTCGATTTCTACATCAACGGGCATGACEST: gi|37426126|gb|CF650813.1|CF650813
genomic: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAGgtatacaata ... taatttccagGCCAACGGCGTCGATTTCTACATCAACGGGCATGAC
EST: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAG GCCAACGGCGTCGATTTCTACATCAACGGGEST: gi|32845140|gb|CD984821.1|CD984821
genomic: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAGgtatacaata ... taatttccagGCCAACGGCGTCGATTTCTACATCAACGGG
EST: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAG GCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACACEST: gi|32844554|gb|CD984235.1|CD984235
genomic: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAGgtatacaata ... taatttccagGCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACAC
EST: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAG GCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACACEST: gi|50335509|gb|CO530635.1|CO530635
genomic: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAGgtatacaata ... taatttccagGCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACAC
EST: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAG GCCAACGGCGTCGATTTTTACATCAACGGGCATGACCACTGCCTGGAACACEST: gi|78114010|gb|DV532399.1|DV532399
genomic: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAGgtatacaata ... taatttccagGCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACAC
EST: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAG GCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACACEST: gi|32844045|gb|CD983726.1|CD983726
genomic: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAGgtatacaata ... taatttccagGCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACAC
EST: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAG GCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACACEST: gi|37393857|gb|CF634195.1|CF634195
genomic: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAGgtatacaata ... taatttccagGCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACAC
EST: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAG GCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACACEST: gi|76280616|gb|DV020184.1|DV020184
genomic: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAGgtatacaata ... taatttccagGCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACAC
EST: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAG GNCCAACG-CGTCGATTTCTAEST: gi|71430080|gb|DR811130.1|DR811130
genomic: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAGgtatacaata ... taatttccagG-CCAACGGCGTCGATTTCTA
EST: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAG GCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACACEST: gi|76012839|gb|DT940009.1|DT940009
genomic: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAGgtatacaata ... taatttccagGCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACAC
EST: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAG GCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACACEST: gi|78105515|gb|DV523933.1|DV523933
genomic: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAGgtatacaata ... taatttccagGCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACAC
EST: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTTCTCCAG GCTCA-CGGCGTCGATTTCTACATCAACGGGCATGEST: gi|211405854|gb|FK952121.1|FK952121
genomic: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAGgtatacaata ... taatttccagGC-CAACGGCGTCGATTTCTACATCAACGGGCATG
EST: ACTGCTTCCAGTCCTCCAG GCCAAC-GSGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACACEST: gi|32835913|gb|CD975591.1|CD975591
genomic: ACTGCTTCCAGTCCTCCAGgtatacaata ... taatttccagGCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACAC
EST: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAG GCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACACEST: gi|18162089|gb|BM331928.1|BM331928
genomic: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAGgtatacaata ... taatttccagGCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACAC
EST: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTGCAGTCCTCCAG GCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACACEST: gi|89758274|gb|DY687518.1|DY687518
genomic: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAGgtatacaata ... taatttccagGCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACAC
EST: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAG GGCCA-CGGCGTCGATTTCTACATCCACGGGCATGACEST: gi|71767916|gb|DR965853.1|DR965853
genomic: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAGgtatacaata ... taatttccagG-CCAACGGCGTCGATTTCTACATCAACGGGCATGAC
EST: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAG GCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACACEST: gi|76289548|gb|DV029116.1|DV029116
genomic: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAGgtatacaata ... taatttccagGCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACAC
EST: ATCATGGTGACACCAAGGAGCTACTGCAGTTACTGCTTCCAGTCCTCCAG GCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACAC
genomic: ATCATGGTGACACCAAGGAGCTACTGCAGCTACTGCTTCCAGTCCTCCAGgtatacaata ... taatttccagGCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACAC
cggagccttccagagtaacgtacggttcttccatggcatttggtttaatttccagGCCAACGGCGTCGATTTCTACATCAACGGGCATGACCACTGCCTGGAACACATCAGCAGCAGAGACAG
tttcc CT-rich tract
atttggtttaattt TA-rich tract