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gtattgacatactgcatacatacatacatttgtagcagtggctttggaatttacaaaccatgagtttgcattcatgtttgcagGCCCCATCTGCCACTGTTGTTGTCAAGGGACTGTCTATGAAGACTAATGATGATGACCTATATCAGATTCTT
species | Zea mays |
transcript | GRMZM2G151614_T03 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: ACAGAAGAAGGGAATATGATTGAGATGATAGGAGGCATGGTGATTCAGTG GCCCCATCTGCCACTGTTATTGTCAAGGGACTGTCTATGAAGACTAATGATEST: gi|33467338|gb|CF244387.1|CF244387
genomic: ACAGAAGAAGGGAATATGATTGGGATGATAGGAGGCATGGTGATTCAGTGgtattgacat ... atgtttgcagGCCCCATCTGCCACTGTTGTTGTCAAGGGACTGTCTATGAAGACTAATGAT
EST: ACAGAAGAAGGGAATATGATTGGGATGATAGGAGGCATGGTGATTCAGTG GCCCCATCTGCCACTGTTGTTGTCAAGGGACTGTCTATGAAGACTAATGAT
genomic: ACAGAAGAAGGGAATATGATTGGGATGATAGGAGGCATGGTGATTCAGTGgtattgacat ... atgtttgcagGCCCCATCTGCCACTGTTGTTGTCAAGGGACTGTCTATGAAGACTAATGAT
tttgtagcagtggctttggaatttacaaaccatgagtttgcattcatgtttgcagGCCCCATCTGCCACTGTTGTTGTCAAGGGACTGTCTATGAAGACTAATGATGATGACCTATATCAGATTCTT
aatttacaaa TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtattgacatactgcatacatacatacatttgtagcagtggctttggaatttacaaaccatgagtttgcattcatgtttgcagGCCCCATCTGCCACTGTTGTTGTCAAGGGACTGTCTATGAAGACTAATGATGATGACCTATATCAGATTCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA