1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtaaagcagttcctttttccaacatatagtgttctttcatcgtacaaaatctttctgatcagatgttctttttcttccatagGAAAATCTAGTGGCCTCAATAGCTTTGGCCTGATGTGGTGCAATG
species | Zea mays |
transcript | GRMZM2G133226_T01 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TGTGGCCAACATTACGACAGCCATTTACCTTGCTACTATCAACCGTATAG GAAAATCTAGTGGCCTCAATAGCTTTGGCCTGATGTGGTGCAATGEST: gi|148933234|gb|EC876885.2|EC876885
genomic: TGTGGCCAACATTACGACAGCCATTTACCTTGCTACTATCAACCGTATAGgtaaagcagt ... tcttccatagGAAAATCTAGTGGCCTCAATAGCTTTGGCCTGATGTGGTGCAATG
EST: TGTGGCCAACATTACGACAGCCATTTACCTTGCTACTATCAACCGTATAG GAAAATCTAGTGGCCTCAATAGCTTTGGCCTGATGTGGTGCAATGEST: gi|149103657|gb|EE289061.2|EE289061
genomic: TGTGGCCAACATTACGACAGCCATTTACCTTGCTACTATCAACCGTATAGgtaaagcagt ... tcttccatagGAAAATCTAGTGGCCTCAATAGCTTTGGCCTGATGTGGTGCAATG
EST: TGTGGCCAACATTACGACAGCCATTTACCTTGCTACTATCAACCGTATAG GAAAATCTAGTGGCCTCAATAGCTTTGGCCTGATGTGGTGCAATGEST: gi|91054599|gb|EB165017.1|EB165017
genomic: TGTGGCCAACATTACGACAGCCATTTACCTTGCTACTATCAACCGTATAGgtaaagcagt ... tcttccatagGAAAATCTAGTGGCCTCAATAGCTTTGGCCTGATGTGGTGCAATG
EST: TGTGGCCAACATTACGACAGCCATTTACCTTGCTACTATCAACCGTATAG GAAAATCTAGTGGCCCTCA-TAGCTTTGGCCTGATEST: gi|148947033|gb|EC892330.2|EC892330
genomic: TGTGGCCAACATTACGACAGCCATTTACCTTGCTACTATCAACCGTATAGgtaaagcagt ... tcttccatagGAAAATCTAGTGGCC-TCAATAGCTTTGGCCTGAT
EST: TGTGGCCAACATTACGACAGCCATTTACCTTGCTACTATCAACCGTATAG GAAAATCTAGTGGCCTCAATAGCTTTGGCCTGATGTGGTGCAATGEST: gi|91054598|gb|EB165016.1|EB165016
genomic: TGTGGCCAACATTACGACAGCCATTTACCTTGCTACTATCAACCGTATAGgtaaagcagt ... tcttccatagGAAAATCTAGTGGCCTCAATAGCTTTGGCCTGATGTGGTGCAATG
EST: TGTGGCCAACATTACGACAGCCATTTACCTTGCTACTATCAACCGTATAG GAAAATCTAGTGGCCTCAATAGCTTTGGCCTGATGTGGTGCAATG
genomic: TGTGGCCAACATTACGACAGCCATTTACCTTGCTACTATCAACCGTATAGgtaaagcagt ... tcttccatagGAAAATCTAGTGGCCTCAATAGCTTTGGCCTGATGTGGTGCAATG
agtgttctttcatcgtacaaaatctttctgatcagatgttctttttcttccatagGAAAATCTAGTGGCCTCAATAGCTTTGGCCTGATGTGGTGCAATG
ttctgat putative branch site (score: 3)
tgttctttttcttcca putative PPT
aaaatcttt TA-rich tract