1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtgcgtgacttgaatctatcttttccggacagggctatactgtagcaccctaatgtatttgttctgtgtcttttagGGTAGCATGTAAAGAGGCCCTAACGAGTTACAACAGCCTTGATAACCCAGCCGCAGGTGCGCCAGTAGAACAGCTAAATGAGCTCGAGGAAGTTTTCAAG
species | Zea mays |
transcript | GRMZM2G104769_T02 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: GAATGGGAGAGCTTATCAAGAGACCGAACTTGTCAACTGCAAAAGCTGAA GGTAGCATGTAAAGAGGCCCTAACGAGTTACAACAGCCTTGATAACCCAGCEST: gi|94476727|gb|EB705685.1|EB705685
genomic: GAATGGGAGAGCTTATCAAGAGACCGAACTTGTCAACTGCAAAAGCTGAAgtgcgtgact ... tgtcttttagGGTAGCATGTAAAGAGGCCCTAACGAGTTACAACAGCCTTGATAACCCAGC
EST: GAATGGGAGAGCTTATCAAGAGACCGAACTTGTCAACTGCAAAAGCTGAA GGTAGCATGTAAAGAGGCCCTAACGAGTTACAACAGCCTTGATAACCCAGCEST: gi|71303900|gb|DR788068.1|DR788068
genomic: GAATGGGAGAGCTTATCAAGAGACCGAACTTGTCAACTGCAAAAGCTGAAgtgcgtgact ... tgtcttttagGGTAGCATGTAAAGAGGCCCTAACGAGTTACAACAGCCTTGATAACCCAGC
EST: GAATGGGAGAGCTTATCAAGAGACCGAACTTGTCAACTGCAAAAGCTGAA GGTAGCATGTAAAGAGGCCCTAACGAGTTACAACAGCCTTGATAACCCAGCEST: gi|61119637|gb|DN560598.1|DN560598
genomic: GAATGGGAGAGCTTATCAAGAGACCGAACTTGTCAACTGCAAAAGCTGAAgtgcgtgact ... tgtcttttagGGTAGCATGTAAAGAGGCCCTAACGAGTTACAACAGCCTTGATAACCCAGC
EST: GAATGGGAGAGCTTATCAAGAGACCGAACTTGTCAACTGCAAAAGCTGAA GGTAGCATGTAAAGAGGCCCTAACGAGTEST: gi|211291927|gb|FL366248.1|FL366248
genomic: GAATGGGAGAGCTTATCAAGAGACCGAACTTGTCAACTGCAAAAGCTGAAgtgcgtgact ... tgtcttttagGGTAGCATGTAAAGAGGCCCTAACGAGT
EST: GAATGGGAGAGCTTATCAAGAGACCGAACTTGTCAACTGCAAAAGCTGAA GGTAGCATGTAAAGAGGCCCTAACGAGTTACAACAGCCTTGATAACCCAGCEST: gi|149106376|gb|EE292096.2|EE292096
genomic: GAATGGGAGAGCTTATCAAGAGACCGAACTTGTCAACTGCAAAAGCTGAAgtgcgtgact ... tgtcttttagGGTAGCATGTAAAGAGGCCCTAACGAGTTACAACAGCCTTGATAACCCAGC
EST: GAATGGGAGAGCTTATCAAGAGACCGAACTTGTCAACTGCAAAAGCTGAA GGTAGCATGTAAAGAGGCCCTAACGAGTTACAACAGCCTTGATAACCCAGCEST: gi|149106375|gb|EE292095.2|EE292095
genomic: GAATGGGAGAGCTTATCAAGAGACCGAACTTGTCAACTGCAAAAGCTGAAgtgcgtgact ... tgtcttttagGGTAGCATGTAAAGAGGCCCTAACGAGTTACAACAGCCTTGATAACCCAGC
EST: GAATGGGAGAGCTTATCAAGAGACCGAACTTGTCAACTGCAAAAGCTGAA GGTAGCATGTAAAGAGGCCCTAACGAGTTACAACAGCCTTGATAACCCAGCEST: gi|91054321|gb|EB164739.1|EB164739
genomic: GAATGGGAGAGCTTATCAAGAGACCGAACTTGTCAACTGCAAAAGCTGAAgtgcgtgact ... tgtcttttagGGTAGCATGTAAAGAGGCCCTAACGAGTTACAACAGCCTTGATAACCCAGC
EST: GAATGGGAGAGCTTATCAAGAGACCGAACTTGTCAACTGCAAAAGCTGAA GGTAGCATGTAAAGAGGCCCTAACGAGTTACAACAGCCTTGATAACCCAGC
genomic: GAATGGGAGAGCTTATCAAGAGACCGAACTTGTCAACTGCAAAAGCTGAAgtgcgtgact ... tgtcttttagGGTAGCATGTAAAGAGGCCCTAACGAGTTACAACAGCCTTGATAACCCAGC
tttccggacagggctatactgtagcaccctaatgtatttgttctgtgtcttttagGGTAGCATGTAAAGAGGCCCTAACGAGTTACAACAGCCTTGATAACCCAGCCGCAGGTGCGCCAGTAGAACAGCTAAATGAGCTCGAGGAAGTTTTCAAG
ccctaat putative branch site (score: 31)
tgtctttt putative PPT
taatgtattt TA-rich tract