1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtaagtttatgtttcgctgtatcagtaacataattcacacgctttgtttcctttcatggtttattgtttagtttccagaatgagttattattatgtgtttagcacctcaaatttaggataaaatcttttatttgtgctaatttctctcaatgattttcattttgcacagTCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCCT
species | Zea mays |
transcript | GRMZM2G098569_T01 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGT TCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCCEST: gi|71306846|gb|DR789579.1|DR789579
genomic: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGTgtaagtttat ... ttttgcacagTCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCC
EST: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGT TCACCGCCGCATCGTTCAGTEST: gi|76293423|gb|DV032991.1|DV032991
genomic: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGTgtaagtttat ... ttttgcacagTCACCGCCGCATCGTTCAGT
EST: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGT TCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCCEST: gi|78117581|gb|DV535968.1|DV535968
genomic: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGTgtaagtttat ... ttttgcacagTCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCC
EST: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGT TCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCCEST: gi|149100778|gb|EE186872.2|EE186872
genomic: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGTgtaagtttat ... ttttgcacagTCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCC
EST: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGT TCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCCEST: gi|211448759|gb|FL324438.1|FL324438
genomic: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGTgtaagtttat ... ttttgcacagTCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCC
EST: ATCACTACCCACGAAGGTGAAAAGGATCTAACTAAATATAACTTGACAGT TCACCGCCGCATCGTTCAGTACAAGACAGCTTTAT-ATTCATTCTACCTTCEST: gi|149100779|gb|EE186873.2|EE186873
genomic: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGTgtaagtttat ... ttttgcacagTCACCGCCGCATCGTTCAGTACAAGACAGCTT-ATTATTCATTCTACCTTC
EST: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGT TCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCCEST: gi|60339232|gb|DN206205.1|DN206205
genomic: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGTgtaagtttat ... ttttgcacagTCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCC
EST: CACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGT TCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCCEST: gi|60359240|gb|DN226213.1|DN226213
genomic: CACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGTgtaagtttat ... ttttgcacagTCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCC
EST: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGT TCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCCEST: gi|60355012|gb|DN221985.1|DN221985
genomic: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGTgtaagtttat ... ttttgcacagTCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCC
EST: TCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGT TCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCCEST: gi|148951737|gb|EC897492.2|EC897492
genomic: TCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGTgtaagtttat ... ttttgcacagTCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCC
EST: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGT TCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCCEST: gi|148950117|gb|EC895653.2|EC895653
genomic: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGTgtaagtttat ... ttttgcacagTCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCC
EST: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGT TCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCCEST: gi|60341646|gb|DN208619.1|DN208619
genomic: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGTgtaagtttat ... ttttgcacagTCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCC
EST: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGT TCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCCEST: gi|71310911|gb|DR791758.1|DR791758
genomic: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGTgtaagtttat ... ttttgcacagTCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCC
EST: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGT TCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCCEST: gi|211504975|gb|FL314285.1|FL314285
genomic: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGTgtaagtttat ... ttttgcacagTCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCC
EST: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGT TCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCCEST: gi|71310909|gb|DR791757.1|DR791757
genomic: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGTgtaagtttat ... ttttgcacagTCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCC
EST: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGT TCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCCEST: gi|148964886|gb|EE015748.2|EE015748
genomic: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGTgtaagtttat ... ttttgcacagTCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCC
EST: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGT TCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCCEST: gi|78117582|gb|DV535969.1|DV535969
genomic: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGTgtaagtttat ... ttttgcacagTCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCC
EST: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGT TCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCCEST: gi|60353036|gb|DN220009.1|DN220009
genomic: ATCACTACCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGTgtaagtttat ... ttttgcacagTCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCC
EST: TCACTACCCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGT TCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCC
genomic: TCACTA-CCCACGAGGGTGAAAAGGATCTAACTAAATATAACTTGACAGTgtaagtttat ... ttttgcacagTCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCC
aggataaaatcttttatttgtgctaatttctctcaatgattttcattttgcacagTCACCGCCGCATCGTTCAGTACAAGACAGCTTATTATTCATTCTACCTTCCT
tgctaat putative branch site (score: 276)
ttttcatttt putative PPT
aaaatcttttatttgt TA-rich tract