Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttaaacttttcttgctcctatctgttttgctgcttcctgattataatgcatgactgctaaatcatacaaatatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTCACCCTATCTGGCTTGAACGTTAGGAGCTACCGCTATTATGATCCTGCAA

Basic information

species Zea mays
transcript GRMZM2G094712_T02
intron # 5
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G094712_T02 (Zea mays), 3'ss of exon 5
lower sequence: LOC_Os01g55540.1 (Oryza sativa), 3'ss of exon 5
-------gttaaacttttcttgctcctatctgttttgctgcttcctgattataatgca-----tgactgctaaatcatacaaatatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTCACCCTATCTGGCTTGAACGTTAGGAGCTACCGCTATTATGATCCTGCAA
        |    |||  ||   || ||  |  |    || |||   |||| ||||||     |||  ||||||| ||| |  | |  ||||||||||||| ||||||||||| ||||||||||| |||||||| ||||| |||||  || ||||| |||  |||||||| |||||||| |||||||||||||
gtaaggaatctgccttggctccttcatagatactgatatggttctacattacaatgcaaagtatgatcgctaaattataaacgtgttctccagCGCACTATATACATCCCACAGCCAACCTGGGGGAATCACCCCAAAGTGTTCACTTTAGCTGGCCTGACTGTTAGGAGTTACCGCTACTATGATCCTGCAA
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|51592836|gb|CV071982.1|CV071982
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|47961783|gb|CN844492.1|CN844492
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|211211706|gb|FL374152.1|FL374152
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|31357714|gb|CD442071.1|CD442071
EST:     CTGGTTCTTTGGGAGTCGGAGGTGAATTTCTTGCAGGGGACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGG
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGG
EST: gi|51592763|gb|CV071909.1|CV071909
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|18053152|gb|BM318810.1|BM318810
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACC
EST: gi|211014760|gb|FL416055.1|FL416055
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|33102539|gb|CF062499.1|CF062499
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|211443956|gb|FL410276.1|FL410276
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|211099665|gb|FL378492.1|FL378492
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|51593002|gb|CV072148.1|CV072148
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|62550538|gb|DN830958.1|DN830958
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|58029674|gb|CX725101.1|CX725101
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|20803254|gb|BQ294304.1|BQ294304
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|33942552|gb|CF349152.1|CF349152
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|108953678|gb|EC364837.1|EC364837
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTTCTT
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGT-CTT
EST: gi|32824566|gb|CD964288.1|CD964288
EST:     TAAGCGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: TAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|58029769|gb|CX725196.1|CX725196
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|44681683|gb|CK786731.1|CK786731
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|47962228|gb|CN844937.1|CN844937
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|67024299|gb|CO453048.1|CO453048
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|33101649|gb|CF061609.1|CF061609
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|47961407|gb|CN844116.1|CN844116
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|108954266|gb|EC365083.1|EC365083
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|94476203|gb|EB705161.1|EB705161
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|32823808|gb|CD963530.1|CD963530
EST:     TAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: TAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|31353308|gb|CD437665.1|CD437665
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|149014131|gb|EE043672.2|EE043672
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|108953108|gb|EC364589.1|EC364589
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAAATCACCCAAAAGTCTT
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAA-TCACCCAAAAGTCTT
EST: gi|62550494|gb|DN830914.1|DN830914
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|6020876|gb|AW065804.1|AW065804
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|211323634|gb|FL399609.1|FL399609
EST:     TGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGNCA-GGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: TGGTTCTTTAAGAGTCGGAGGTGAATTTCTTG-CAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|47961406|gb|CN844115.1|CN844115
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|109637234|gb|EC590779.1|EC590779
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|31356983|gb|CD441340.1|CD441340
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|62550589|gb|DN831009.1|DN831009
EST:     CGGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGGAAATCACCCAAAAGTCTT
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGG-AAATCACCCAAAAGTCTT
EST: gi|211041751|gb|FL371252.1|FL371252
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAA-GTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|211199749|gb|FL411771.1|FL411771
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|211493670|gb|FL398960.1|FL398960
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|26456907|gb|CA828490.1|CA828490
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|45213782|gb|CK850009.1|CK850009
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTGCATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|20507973|gb|BQ279845.1|BQ279845
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|47961457|gb|CN844166.1|CN844166
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|38502508|gb|CF972368.1|CF972368
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|211504654|gb|FL412020.1|FL412020
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|211449902|gb|FL391246.1|FL391246
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|18383833|gb|BM417033.1|BM417033
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACC
EST: gi|44682191|gb|CK787239.1|CK787239
EST:     CTGGCTCTTTAAGAGTCAGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGTC-CTATCTACATCCCACAACCAACCTGGGGAAATCAC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCG-CACTATCTACATCCCACAACCAACCTGGGGAAATCAC
EST: gi|211535952|gb|FL381085.1|FL381085
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCANGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|213188579|gb|FM192962.1|FM192962
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|148986993|gb|EE030811.2|EE030811
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|31250263|gb|CD219287.1|CD219287
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAAATCACCCAAAAGTCTT
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAA-TCACCCAAAAGTCTT
EST: gi|211296653|gb|FL387902.1|FL387902
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAG-CACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|213184108|gb|FM191702.1|FM191702
EST:     CTGGTTCTTTAAGAGTCGGAGNTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACA
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACA
EST: gi|149108013|gb|EE292368.2|EE292368
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|31361794|gb|CD446151.1|CD446151
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|33101615|gb|CF061575.1|CF061575
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|211313595|gb|FL415828.1|FL415828
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|9731418|gb|BE510170.1|BE510170
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|111433992|gb|EE298061.1|EE298061
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGGAAATCACCCAAAAGTCTT
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGG-AAATCACCCAAAAGTCTT
EST: gi|109637672|gb|EC591217.1|EC591217
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGGAAATCACCCAAAAGTCTT
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGG-AAATCACCCAAAAGTCTT
EST: gi|111145728|gb|EE258080.1|EE258080
EST:     TGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGGCACTATCCCGAG                         CGCACTATCTACA
genomic: TGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGG-CACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACA
EST: gi|211289848|gb|FL370551.1|FL370551
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|31351488|gb|CD435845.1|CD435845
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|148940851|gb|EC885683.2|EC885683
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|32825504|gb|CD965226.1|CD965226
EST:     TAAGGGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: TAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|31363808|gb|CD448163.1|CD448163
EST:     CTGGTTCTTTAAGAGGCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|148941397|gb|EC886314.2|EC886314
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCCAGGGACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGGAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|211493669|gb|FL398959.1|FL398959
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|33101567|gb|CF061527.1|CF061527
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|31358307|gb|CD442664.1|CD442664
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|31250213|gb|CD219237.1|CD219237
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|9255298|gb|BE345766.1|BE345766
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|211130248|gb|FL407379.1|FL407379
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|32791023|gb|CD943259.1|CD943259
EST:     TAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: TAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|32848381|gb|CD988062.1|CD988062
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|47961719|gb|CN844428.1|CN844428
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACCATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|29130123|gb|CB380827.1|CB380827
EST:     TGGTTCTTTAAGAGTCGGAGGTGAATTTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: TGGTTCTTTAAGAGTCGGAGGTGAATTT-CTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|108823876|gb|EC277884.1|EC277884
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|9255430|gb|BE345898.1|BE345898
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|211159439|gb|FL370490.1|FL370490
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|9461770|gb|BE453896.1|BE453896
EST:     CTGGGTCTTTAAGAGTCGGAGGCGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|62525922|gb|DN828570.1|DN828570
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCGCTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|32823509|gb|CD963231.1|CD963231
EST:     TAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: TAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|149065671|gb|EE286793.2|EE286793
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|9794571|gb|BE552879.1|BE552879
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|109637534|gb|EC591079.1|EC591079
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCGCTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|33102411|gb|CF062371.1|CF062371
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|211060007|gb|FL387699.1|FL387699
EST:     TGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGGCA-GGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: TGGTTCTTTAAGAGTCGGAGGTGAATTTCTTG-CAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|51592747|gb|CV071893.1|CV071893
EST:     CTGGTTCTTTAAGAGTCGGAGGCGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|211363355|gb|FL393791.1|FL393791
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|60672637|gb|DN475335.1|DN475335
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|40485897|gb|CK394794.1|CK394794
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|211266269|gb|FL388730.1|FL388730
EST:     TGGTTCTTTA-GAGTCGGAGGTGAATTTCTTTGCAGGG-ACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: TGGTTCTTTAAGAGTCGGAGGTGAATTTCTT-GCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
EST: gi|211245085|gb|FL389172.1|FL389172
EST:     CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAG                         CGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC
genomic: CTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 638

CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTACTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTCACCCTATCTGGCTTGAACGTTAGGAGCTACCGCTATTATGATCCTGCAA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1468

CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTACTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTCACCCTATCTGGCTTGAACGTTAGGAGCTACCGCTATTATGATCCTGCAA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1121

CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTACTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTCACCCTATCTGGCTTGAACGTTAGGAGCTACCGCTATTATGATCCTGCAA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1707

CCCTGCTATTCAGGAGAATAGGGTTGCTACCGTGCAGTGCCTATCGGGTACTGGTTCTTTAAGAGTCGGAGGTGAATTTCTTGCAAGGCACTATCACGAGgttaaacttt ... tatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTCACCCTATCTGGCTTGAACGTTAGGAGCTACCGCTATTATGATCCTGCAA




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tttgctgcttcctgattataatgcatgactgctaaatcatacaaatatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTCACCCTATCTGGCTTGAACGTTAGGAGCTACCGCTATTATGATCCTGCAA
                             tgctaaa  putative branch site (score: 1707)
                                taaatcatacaaatat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gttaaacttttcttgctcctatctgttttgctgcttcctgattataatgcatgactgctaaatcatacaaatatattccagCGCACTATCTACATCCCACAACCAACCTGGGGAAATCACCCAAAAGTCTTCACCCTATCTGGCTTGAACGTTAGGAGCTACCGCTATTATGATCCTGCAA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT