Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   		13  
 5'  3'   		14  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...accaggttaaatttaacaatgatattgttttctttagtaccctgtttattgagaaattcccatcttgtttgattatacagtcattgtgtttcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGTTCTGGAAAACCTATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACT

Basic information

species Zea mays
transcript GRMZM2G094497_T01
intron # 5
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G094497_T01 (Zea mays), 3'ss of exon 5
lower sequence: LOC_Os06g37180.1 (Oryza sativa), 3'ss of exon 5
accaggttaaatttaacaatgatattgttttctttagtaccctgtttattgagaaattcccatcttgtttgattatacagtcattgtg----tttcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGTTCTGGAAAACCTATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACT
    |  |||  |  |   |  | | ||||   |   | || |||||     | |   |  |  | |    |||    | |   ||||    ||  || || ||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| || || ||||| || |||||||
---tgaataatctataagtttttgtagtttatatcttttccttgtttgc-atgtagcactgaagtagcggcattgcttaatatgtgtggtaattctttctatagGTCCTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGATCTGGAAAACCCATTGATAATGGCCCACCTATTTTGCCAGAGGCCTACT

upper sequence: GRMZM2G094497_T01 (Zea mays), 3'ss of exon 5
lower sequence: GLYMA10G42940.2 (Glycine max), 3'ss of exon 5
-----accaggttaaatttaacaatgatattgtt-ttctttagtaccctgtttattgagaaattcccatcttgtttgattatacagtcattgtgtttcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGTTCTGGAAAACCTATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACT
         |  |   ||| ||| || || | ||  | | | | |  |  ||||||    |  |   | |||  |   || | |  || || ||||| |   |||||| || ||||||||||||||||| || |||||||| ||||| |||||||| ||||||||||| ||||| ||||| || || || || || || || ||| 
tttttctttgaatttcttttaca-tgctacttttactgtattggaatcaatttattc--caccttttaacttcctc--ttttcctctctttttgtttgtcc-acagGTGTTAAAAACTCCTGTCTCACTAGACATGCTTGGACGCATATTTAATGGCTCTGGAAAACCAATTGATAATGGTCCACCAATTTTACCTGAGGCTTACC

upper sequence: GRMZM2G094497_T01 (Zea mays), 3'ss of exon 5
lower sequence: GLYMA18G48280.1 (Glycine max), 3'ss of exon 5
-----accaggttaaatttaacaatgata--ttgttttctttagtaccctgtttattgagaaattcccatcttgtttgattatacagtcattgtgtttcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGTTCTGGAAAACCTATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACT-
     |     |    ||| |   ||||   ||| |||  || | | |  |||||       | |||||| ||      ||    | | ||||| |||  || |||||| || |||||||| || ||| | || |||||||| ||||| || ||||||||||||||||| ||||| ||||| || || || || || || || |||| 
tgattattgaatcctttttcattttgattctttgattttgtttgaatca-gtttaactgttgactcccatttt------ttccttaattattgt-ttttgttcacaggTGTTAAAAACTCCAGTATCATTGGACATGCTTGGCCGCATATTCAATGGTTCTGGAAAACCAATTGATAATGGTCCACCCATTTTACCTGAGGCTTACTT

upper sequence: GRMZM2G094497_T01 (Zea mays), 3'ss of exon 5
lower sequence: GLYMA09G38110.2 (Glycine max), 3'ss of exon 5
---accaggttaaatttaacaatgatattgttttctttagt---accctgtttattgagaaattcccatcttgtttgattatacagtcattgtgtttcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGTTCTGGAAAACCTATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACT
   |  |    |  |||  || |   |||||||  |||  |   |  | |||||       | |||||| || |||       || | ||||| |||  || |||||| || |||||||| || ||| | || |||||||| ||||| || ||||||||||||||||| ||||| ||||| || || ||||| ||||| || ||||
ttgattattgaatctttttcattttgattgtttgatttgctttgattcagtttaactgttgactcccatttttttt-----ctcaattattgt-ttttgttcacagGTGTTAAAAACTCCAGTATCATTGGACATGCTTGGCCGCATATTCAATGGTTCTGGAAAACCAATTGATAATGGTCCACCCATATTACCCGAGGCTTACT

upper sequence: GRMZM2G094497_T01 (Zea mays), 3'ss of exon 5
lower sequence: GLYMA20G24070.1 (Glycine max), 3'ss of exon 6
-accaggttaaatttaacaatgatattgttttcttta----gtaccctgtttattgagaaattcccatcttgtttgattatacagtcattgtgtttcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGTTCTGGAAAACCTATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACT
       || |||||       || ||  |||  ||     | |  | |||||||    |  |     |||  |   || | |  || || ||||| |   |||||| || ||||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||||| ||||| || || || || || || || ||| 
tttttctttgaatttcttttacatgttacttttattgtattggaatcagtttattc--caccttttgacttcctc--ttttcctctctttttgtttgtcc-acagGTGTTAAAAACTCCTGTCTCACTGGACATGCTTGGACGCATATTTAATGGTTCTGGAAAACCAATTGATAATGGTCCACCAATTTTACCTGAGGCTTACC

upper sequence: GRMZM2G094497_T01 (Zea mays), 3'ss of exon 5
lower sequence: AT1G76030.1 (Arabidopsis thaliana), 3'ss of exon 5
-------accaggttaaatttaacaatgatattgttttctttag---taccctgtttattgagaaattccca--tcttgtttgattatacagtcattgtgtttcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGTTCTGGAAAACCTATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACT
       ||||    ||||    |     |   |  ||    ||   |       | ||||    ||| |    || ||  |  || |  |  |  | ||| |||||  |||||||||||||| ||||| ||| | || |||||||||||||| ||||| ||||| ||||| || ||||| |||||||| || ||  |||| ||||| ||| 
gtaatttaccataa-aaatccttcgtccctccagcatttcgcagatttgttgaaatgattggttgatttctgcttcctgcattttttttaaaccggtttgtgtcttt--cagGTTTTGAAAACACCTGTATCATTGGACATGCTTGGGCGCATATTTAACGGTTCAGGAAAGCCGATTGATAATGGCCCTCCTATTCTGCCAGAAGCATACC

upper sequence: GRMZM2G094497_T01 (Zea mays), 3'ss of exon 5
lower sequence: AT4G38510.4 (Arabidopsis thaliana), 3'ss of exon 6
accaggttaaatttaacaatgatattgttt-tctttagtaccctgtttattgagaaattcccatcttgtttgattatacagtcattg-tgtttcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGTTCTGGAAAACCTATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACT
                          |||| | |||  ||||  |||  || |   ||     |||    |      ||| |      ||||| ||  | ||||||||||||||||||| ||  | ||||||||||| ||||| || |||||||| || || || |||||||| || || || |||||||| || || ||||
--------------------------gtttgtttttgctaccaagtt--ttaaagtatcagtgtctataatatactcacattttccaatgttttttccatagGTTTTGAAAACTCCTGTTTCTTTGGATATGCTTGGTCGCATCTTCAATGGTTCAGGGAAGCCCATTGACAACGGTCCACCTATATTGCCTGAGGCGTACT

upper sequence: GRMZM2G094497_T01 (Zea mays), 3'ss of exon 5
lower sequence: Vv03s0038g02760.t01 (Vitis vinifera), 3'ss of exon 5
accaggttaaatttaacaatgatattgttttctttagtaccctgttta--ttgagaaattcccatct-----tgtttgattatacagtcattgtgtttcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGTTCTGGAAAACCTATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACT
     || ||   |  |  ||||  || | ||| ||||| |   || |  |  |    || |  |||     | ||| ||| |       |  |     || |||||||||||||||||||||||||| | |||||||||||||| || ||||||||||| || ||||| ||||| ||||| || || |||||||| || || ||||
-----gtcaagcctttctgtgat--tgctatctctagtatcagtttgagatcaacttctttctttctgtagatatttcattgtgtccctttcttaccctttatacagGTTTTGAAAACTCCTGTCTCATTGGATATGCTTGGGCGTATCTTTAATGGTTCAGGGAAACCCATTGATAATGGGCCTCCTATATTGCCAGAGGCTTACT

upper sequence: GRMZM2G094497_T01 (Zea mays), 3'ss of exon 5
lower sequence: Vv18s0001g01020.t01 (Vitis vinifera), 3'ss of exon 5
accaggttaaatttaacaatgatattgttttctttagtaccctgtttattgagaaattcccatcttgtt-tgattatacagtcattgtgtttcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGTTCTGGAAAACCTATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACT
 |    |  |    | |  |  | ||   || |    | | | |||| |    | |||       ||   || || |   ||       ||| || | |||||||||||||| ||||| ||||| ||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| ||  |||| || || ||| 
-ctctctctacaagagcctttctctttacttttaacctcctcagtttgtctgaatattttggcaatgaaatgtttgtctggttgaatattttgttgtgcagGTTTTGAAAACACCTGTATCACTGGATATGCTTGGCCGCATTTTTAATGGTTCTGGAAAACCCATTGATAATGGCCCCCCAATTCTGCCAGAGGCTTACC

upper sequence: GRMZM2G094497_T01 (Zea mays), 3'ss of exon 5
lower sequence: PP1S85_75V6.1 (Physcomitrella patens), 3'ss of exon 5
accaggttaaatttaacaatgatattgttttctttagt--accctgtttattgagaaattcccatcttgtttgattatacagtcattgt--gtttcttttac-----agGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGTTCTGGAAAACCTATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACT
         | | |   ||||||||| | || ||   |  | |  | ||     || ||     |  |  | ||||||  |      ||  |||  | ||       ||||  ||||||| || |||||  | || ||||| || || ||||| ||||||||||| |||||||||||||| ||||| || ||  |  | ||||| ||  
---------attgtccgaatgatattctatttttctatggatcgcggttgggccgacatgtgtttactactcgattatcgacctgcagttggttcttgttgtggtttagGTGCTGAAAACACCAGTCTCGTTAGACATGCTGGGACGTATTTTCAATGGTTCTGGCAAACCTATTGACAACGGCCCTCCAATTCTTGCAGAAGCTTATC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|194716810|gb|FK933969.1|FK933969
EST:     GAACTTCTGGAATAGACAACAAATACACAACTGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211469120|gb|FL062058.1|FL062058
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211476692|gb|FL062093.1|FL062093
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211476700|gb|FL062101.1|FL062101
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211466590|gb|FL062041.1|FL062041
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211459011|gb|FL062002.1|FL062002
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211355901|gb|FL061989.1|FL061989
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211042632|gb|FL062114.1|FL062114
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|58029618|gb|CX725045.1|CX725045
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|31358862|gb|CD443219.1|CD443219
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211474177|gb|FL062085.1|FL062085
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211042620|gb|FL062102.1|FL062102
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|32838409|gb|CD978087.1|CD978087
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|13150538|gb|BG320860.1|BG320860
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211466588|gb|FL062039.1|FL062039
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211045585|gb|FL062117.1|FL062117
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTT
EST: gi|211045586|gb|FL062118.1|FL062118
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|32910787|gb|CF015599.1|CF015599
EST:     GACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211476689|gb|FL062090.1|FL062090
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211459001|gb|FL061992.1|FL061992
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211474168|gb|FL062076.1|FL062076
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|19058187|gb|BM736854.1|BM736854
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAAC
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAAC
EST: gi|211469113|gb|FL062051.1|FL062051
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211464051|gb|FL062022.1|FL062022
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|31355490|gb|CD439847.1|CD439847
EST:     GATTTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTATGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211466591|gb|FL062042.1|FL062042
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211466583|gb|FL062034.1|FL062034
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211464054|gb|FL062025.1|FL062025
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211471644|gb|FL062069.1|FL062069
EST:     GAACTTCTGGAGTAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211476695|gb|FL062096.1|FL062096
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|32929168|gb|CF033980.1|CF033980
EST:     AACTTCTGGAATAGACAACAAATACACANCCGTGCAG-TTACAGGCNGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGG
genomic: AACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGC-GAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGG
EST: gi|211464058|gb|FL062029.1|FL062029
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211459012|gb|FL062003.1|FL062003
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211042625|gb|FL062107.1|FL062107
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211464059|gb|FL062030.1|FL062030
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTTCAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211471635|gb|FL062060.1|FL062060
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCAAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211042624|gb|FL062106.1|FL062106
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|31349484|gb|CD433841.1|CD433841
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCACATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211355897|gb|FL061985.1|FL061985
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|14191177|gb|BG833407.1|BG833407
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|31351385|gb|CD435742.1|CD435742
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211042627|gb|FL062109.1|FL062109
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211461526|gb|FL062008.1|FL062008
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211471646|gb|FL062071.1|FL062071
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211466592|gb|FL062043.1|FL062043
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211042631|gb|FL062113.1|FL062113
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211355900|gb|FL061988.1|FL061988
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211042628|gb|FL062110.1|FL062110
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211474179|gb|FL062087.1|FL062087
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211471645|gb|FL062070.1|FL062070
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211476697|gb|FL062098.1|FL062098
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAA                         GTTTTTGAAA-CTCCTGTCTCACTTGATATGCTGGGGCGCATTTTTA-TGG
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTT-GAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGG
EST: gi|30160605|gb|CB924334.1|CB924334
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211461527|gb|FL062009.1|FL062009
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211464060|gb|FL062031.1|FL062031
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAWAACTCCTGTCTCACTTGATATGCTTGGGC
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGC
EST: gi|211459000|gb|FL061991.1|FL061991
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATT
EST: gi|32850751|gb|CD990432.1|CD990432
EST:     TGCAGTTTACAGGCGAG                         GTTTTGANAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: TGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211476699|gb|FL062100.1|FL062100
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|31628315|gb|CD526548.1|CD526548
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211469119|gb|FL062057.1|FL062057
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|14191176|gb|BG833406.1|BG833406
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211469117|gb|FL062055.1|FL062055
EST:     GAACTTCTGGAATAGACNACAAATACACAACCGTGCAGTTTACAGGCGAA                         GTTTTAAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTTATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211459009|gb|FL062000.1|FL062000
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTTATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211469112|gb|FL062050.1|FL062050
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211459007|gb|FL061998.1|FL061998
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211474171|gb|FL062079.1|FL062079
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211469111|gb|FL062049.1|FL062049
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211471641|gb|FL062066.1|FL062066
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211464050|gb|FL062021.1|FL062021
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211459003|gb|FL061994.1|FL061994
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211464057|gb|FL062028.1|FL062028
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|31358847|gb|CD443204.1|CD443204
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|33102277|gb|CF062237.1|CF062237
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211469108|gb|FL062046.1|FL062046
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211459010|gb|FL062001.1|FL062001
EST:     GAACTTCTGGAATAGACRACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTG
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTG
EST: gi|211466585|gb|FL062036.1|FL062036
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211476687|gb|FL062088.1|FL062088
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
EST: gi|211458999|gb|FL061990.1|FL061990
EST:     GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAG                         GTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT
genomic: GAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 491

GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGTTCTGGAAAACCTATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 866

GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGTTCTGGAAAACCTATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 495

GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGTTCTGGAAAACCTATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 743

GTCTTTGAAGGAACTTCTGGAATAGACAACAAATACACAACCGTGCAGTTTACAGGCGAGgtacttcatc ... tcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGTTCTGGAAAACCTATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACT




 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttattgagaaattcccatcttgtttgattatacagtcattgtgtttcttttacagGTTTTGAAAACTCCTGTCTCACTTGATATGCTTGGGCGCATTTTTAATGGTTCTGGAAAACCTATTGACAATGGCCCCCCGATATTGCCCGAAGCCTACT
                     gtttgat  putative branch site (score: 743)
                                         tgtttctttt  putative PPT
                      tttgattata  TA-rich tract