1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtgtgtattaagttccaacagcgccttcatgttataataatattgagttatggtgggcttgtggctacatcgttatactacataatgtaatggtgaaggaaggtgaatcatcgttggaatttttcttccttctaaaccttgcttgtactgttgaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTTCCTTCGACCCTGCAAG
species | Zea mays |
transcript | GRMZM2G088212_T01 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|51592848|gb|CV071994.1|CV071994
genomic: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|166662207|gb|EG171766.1|EG171766
genomic: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGAEST: gi|6563780|gb|AW231312.1|AW231312
genomic: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGA
EST: CGGAGAAGGTCCCCATTCCTCNCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|213172790|gb|FM182986.1|FM182986
genomic: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGAEST: gi|83278461|gb|DV942469.1|DV942469
genomic: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|211375390|gb|FK987875.1|FK987875
genomic: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|51592345|gb|CV071491.1|CV071491
genomic: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: GGAGAAGGTCCTGCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|5901194|gb|AW042294.1|AW042294
genomic: GGAGAAGGTCC-CCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: TCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|45567401|gb|CK985553.1|CK985553
genomic: TCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|6227062|gb|AW155766.1|AW155766
genomic: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: AAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|24768568|gb|CA403697.1|CA403697
genomic: AAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: AGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|60351292|gb|DN218265.1|DN218265
genomic: AGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: CCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|60348828|gb|DN215801.1|DN215801
genomic: CCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|37361365|gb|CF602654.1|CF602654
genomic: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAG-ATAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|60357381|gb|DN224354.1|DN224354
genomic: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|5124253|gb|AI745989.1|AI745989
genomic: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|12973094|gb|BG268309.1|BG268309
genomic: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAGCAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|6827986|gb|AW331629.1|AW331629
genomic: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: CGGAGAAGGTCCCCATTCCTCGCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGANCAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|24769943|gb|CA405072.1|CA405072
genomic: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: AGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|8930216|gb|BE224980.1|BE224980
genomic: AGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGAEST: gi|31350569|gb|CD434926.1|CD434926
genomic: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: CGTATAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGGTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|8366919|gb|BE049927.1|BE049927
genomic: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: CAGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|13237225|gb|BG355239.1|BG355239
genomic: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|83279341|gb|DV943349.1|DV943349
genomic: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|16378441|gb|BI992446.1|BI992446
genomic: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: TCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|60342963|gb|DN209936.1|DN209936
genomic: TCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|38502557|gb|CF972417.1|CF972417
genomic: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTEST: gi|38502631|gb|CF972491.1|CF972491
genomic: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
EST: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAG TGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
genomic: CGGAGAAGGTCCCCATTCCTCCCCGTGTTCTAACAGGCTGTCGTGAGAAGgtgtgtatta ... gaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGT
tcatcgttggaatttttcttccttctaaaccttgcttgtactgttgaatctgcagTGCATCATTCAGAAGGAGAACAACTTCAAGCAGGCTGGCGAGAGATATCGTTCCTTCGACCCTGCAAG
ttctaaa putative branch site (score: 440)
aatttttctt TA-rich tract