1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtatatctgggactatttcttttttgtgttggccaaagttggttctttgattgatattggtgtgttttgttcatgcttgagtagGTCAAACCAGCATTGCCAGCACTACAGCACCTTATTCACTCTCAGGATGAGGAGGTCCTAACTGATGCCTGCTGGGCGCTCTCATACTTGTCTGATGGGA
species | Zea mays |
transcript | GRMZM2G088088_T01 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: GGACTCTCTCCAACTTCTGTCGGGGGAAGCCACAACCAAACTTTGATCAG GTCAAACCAGCATTGCCAGCACTACAGCACCTTATTCACTCTCAGGATGAGEST: gi|211452354|gb|FL292619.1|FL292619
genomic: GGACTCTCTCCAACTTCTGTCGGGGGAAGCCACAACCAAACTTTGATCAGgtatatctgg ... gcttgagtagGTCAAACCAGCATTGCCAGCACTACAGCACCTTATTCACTCTCAGGATGAG
EST: GGACTCTCTCCAACTTCTGTCGGGGGAAGCCACAACCAAACTTTGATCAG GTCAAACCAGCATTGCCAGCACTACAGCACCTTATTCACTCTCAGGATGAGEST: gi|211008179|gb|FL253536.1|FL253536
genomic: GGACTCTCTCCAACTTCTGTCGGGGGAAGCCACAACCAAACTTTGATCAGgtatatctgg ... gcttgagtagGTCAAACCAGCATTGCCAGCACTACAGCACCTTATTCACTCTCAGGATGAG
EST: GGACTCTCTCCAACTTCTGTCGGGGGAAGCCACAACCAAACTTTGATCAG GTCAAACCAGCATTGCCAGCACTACAGCACCTTATTCACTCTCAGGATGAAEST: gi|213179381|gb|FM182985.1|FM182985
genomic: GGACTCTCTCCAACTTCTGTCGGGGGAAGCCACAACCAAACTTTGATCAGgtatatctgg ... gcttgagtagGTCAAACCAGCATTGCCAGCACTACAGCACCTTATTCACTCTCAGGATGAG
EST: CACAACCAAACTTTGATCAG GTCAAACCAGCATTGCCAGCACTACAGCACCTTATTCACTCTCAGGATGAGEST: gi|211452351|gb|FL292616.1|FL292616
genomic: CACAACCAAACTTTGATCAGgtatatctgg ... gcttgagtagGTCAAACCAGCATTGCCAGCACTACAGCACCTTATTCACTCTCAGGATGAG
EST: GGACTCTCTCCAACTTCTGTCGGGGGAAGCCACAACCAAACTTTGATCAG GTCAAACCAGCATTGCCAGCACTACAGCACCTTATTCACTCTCAGGATGAGEST: gi|67023557|gb|CO452306.1|CO452306
genomic: GGACTCTCTCCAACTTCTGTCGGGGGAAGCCACAACCAAACTTTGATCAGgtatatctgg ... gcttgagtagGTCAAACCAGCATTGCCAGCACTACAGCACCTTATTCACTCTCAGGATGAG
EST: GGACTCTCTCCAACTTCTGTCGGGGGAAGCC-CAACCAAACTTTGATCAG GTCAAACCAGCATTGCCAGCACTACAGCACCTTATTCACTCTCAGGATGANEST: gi|78078677|gb|DV507089.1|DV507089
genomic: GGACTCTCTCCAACTTCTGTCGGGGGAAGCCACAACCAAACTTTGATCAGgtatatctgg ... gcttgagtagGTCAAACCAGCATTGCCAGCACTACAGCACCTTATTCACTCTCAGGATGA-
EST: GACTCTCTCCAACTTCTGTCGGGGGGAAGC-ACAACCAAACTTTGATCAG GTCAAACCAGCATTGCCAGCACTACAGCACCTTATTEST: gi|211049546|gb|FK991525.1|FK991525
genomic: GACTCTCTCCAACTTCTGTCGGGGG-AAGCCACAACCAAACTTTGATCAGgtatatctgg ... gcttgagtagGTCAAACCAGCATTGCCAGCACTACAGCACCTTATT
EST: GGACTCTCTCCAACTTCTGTCGGGGGAAGCCACAACCAAACTTTGATCAG GTCAAACCAGCATTGCCAGCACTACAGCACCTTATTCACTCTCAGGATGAGEST: gi|6865203|gb|AW360553.1|AW360553
genomic: GGACTCTCTCCAACTTCTGTCGGGGGAAGCCACAACCAAACTTTGATCAGgtatatctgg ... gcttgagtagGTCAAACCAGCATTGCCAGCACTACAGCACCTTATTCACTCTCAGGATGAG
EST: GGACTCTCTCCAACTTCTGTCGGGGGAAGCCGCAACCAAACTTTGATCAG GTCAAACCAGCATTGCCAGCACTACAGCACCTTATTCACTCTCAGGATGAGEST: gi|211331752|gb|FL022649.1|FL022649
genomic: GGACTCTCTCCAACTTCTGTCGGGGGAAGCCACAACCAAACTTTGATCAGgtatatctgg ... gcttgagtagGTCAAACCAGCATTGCCAGCACTACAGCACCTTATTCACTCTCAGGATGAG
EST: GGACTCTCTCCAACTTCTGTCGGGGGAAGCCACAACCAAACTTTGATCAG GTCAAACCAGCATTGCCAGCACTACAGCACCTTATTCACTCTCAGGATGAG
genomic: GGACTCTCTCCAACTTCTGTCGGGGGAAGCCACAACCAAACTTTGATCAGgtatatctgg ... gcttgagtagGTCAAACCAGCATTGCCAGCACTACAGCACCTTATTCACTCTCAGGATGAG
tggccaaagttggttctttgattgatattggtgtgttttgttcatgcttgagtagGTCAAACCAGCATTGCCAGCACTACAGCACCTTATTCACTCTCAGGATGAGGAGGTCCTAACTGATGCCTGCTGGGCGCTCTCATACTTGTCTGATGGGA
gattgat putative branch site (score: 448)
attgatatt TA-rich tract