1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtgcgtgcgtgcgtctctgtctcgagtgccgtattatctcgtgtttccgcacctgattcatgctccaagccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGCTGAAGCACCAAGAGCTGTACAAG
species | Zea mays |
transcript | GRMZM2G077837_T02 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTTCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|71450311|gb|DR831361.1|DR831361
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|110195280|gb|EC877177.1|EC877177
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCTTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|18181086|gb|BM382290.1|BM382290
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|211462848|gb|FL343991.1|FL343991
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|71764189|gb|DR962126.1|DR962126
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|78076752|gb|DV505186.1|DV505186
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|78023493|gb|DV491880.1|DV491880
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTTTACTGCTTCCTGGGCTCCAACACCTTCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|85152337|gb|DW587699.1|DW587699
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|78116810|gb|DV535197.1|DV535197
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|108824089|gb|EC278097.1|EC278097
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTTCCACGTTCGATGAAGEST: gi|78075164|gb|DV503598.1|DV503598
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGT-CCACGT-CGATGAAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|76912912|gb|DV164929.1|DV164929
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|60346992|gb|DN213965.1|DN213965
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|149098138|gb|EE184098.2|EE184098
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTTTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|71316211|gb|DR794781.1|DR794781
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|4804469|gb|AI665339.2|AI665339
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTTCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|60350607|gb|DN217580.1|DN217580
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|5468689|gb|AI834480.1|AI834480
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTTCGCGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCCCGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|60347782|gb|DN214755.1|DN214755
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|50339087|gb|CO534213.1|CO534213
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: CTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|108953048|gb|EC364559.1|EC364559
genomic: CTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|149041288|gb|EE046924.2|EE046924
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|211410031|gb|FL353826.1|FL353826
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCEST: gi|4647533|gb|AI622608.1|AI622608
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGC
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|9953196|gb|BE639779.1|BE639779
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTTCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|211109679|gb|FL338746.1|FL338746
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|38502634|gb|CF972494.1|CF972494
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|149099025|gb|EE185041.2|EE185041
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|71762408|gb|DR960345.1|DR960345
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCTTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|78085911|gb|DV514304.1|DV514304
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|18179310|gb|BM380520.1|BM380520
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|149083755|gb|EE173117.2|EE173117
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCGACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|148933476|gb|EC877178.2|EC877178
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|110965140|gb|EE185040.1|EE185040
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|149009633|gb|EE041581.2|EE041581
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|211033503|gb|FL333365.1|FL333365
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|88748308|gb|DY532449.1|DY532449
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|71595770|gb|DR906521.1|DR906521
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|88755300|gb|DY539441.1|DY539441
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|78083475|gb|DV511868.1|DV511868
genomic: TACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|5525273|gb|AI861112.1|AI861112
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|50339088|gb|CO534214.1|CO534214
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|16917203|gb|BM073180.1|BM073180
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|5124075|gb|AI745916.1|AI745916
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTTCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|149074443|gb|EE162835.2|EE162835
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|71764190|gb|DR962127.1|DR962127
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|88755301|gb|DY539442.1|DY539442
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|78076751|gb|DV505185.1|DV505185
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|149098139|gb|EE184099.2|EE184099
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAG CTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGEST: gi|78085399|gb|DV513792.1|DV513792
genomic: TAGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAG
EST: AGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCCCATCATCGAG CTAGCCCGAGCTGCAACGGCTGT
genomic: AGCGTTCTACTGCTTCCTCGGCTCCAACACCTGCACGGCC-ATCATCGAGgtgcgtgcgt ... agccgtgtagCTAGCC-GAGCTGCAACGGCTGT
cgagtgccgtattatctcgtgtttccgcacctgattcatgctccaagccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGCTGAAGCACCAAGAGCTGTACAAG
acctgat putative branch site (score: 4)
tattatct TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtgcgtgcgtgcgtctctgtctcgagtgccgtattatctcgtgtttccgcacctgattcatgctccaagccgtgtagCTAGCCGAGCTGCAACGGCTGTCCACGTCGATGAAGAAGCTGGAGAAGGAGCTGAAGCACCAAGAGCTGTACAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT