1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtgatttctttgaattttaatttccttttatgcttgttcaaacctttatcctgaaagctgtaaactggtccaacaggcttgttttaatttctatattggcattgttcccttctatccagGCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTTCAAGGATATAATTGACGAGGCGATTGGTGAAG
species | Zea mays |
transcript | GRMZM2G075485_T01 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAG GCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTTEST: gi|91870824|gb|EB401103.1|EB401103
genomic: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAGgtgatttctt ... ttctatccagGCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTT
EST: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAG GCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTTEST: gi|78074189|gb|DV502623.1|DV502623
genomic: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAGgtgatttctt ... ttctatccagGCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTT
EST: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAG GCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTTEST: gi|32845400|gb|CD985081.1|CD985081
genomic: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAGgtgatttctt ... ttctatccagGCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTT
EST: AAAACGGACTTGAAGGAACTCTATACAAAATATAAGGGCAACATGAACAG GCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTTEST: gi|78116316|gb|DV534703.1|DV534703
genomic: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAGgtgatttctt ... ttctatccagGCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTT
EST: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAG GCTTTTCTGCGCAATGATTTGEST: gi|32850389|gb|CD990070.1|CD990070
genomic: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAGgtgatttctt ... ttctatccagGCTTTTCTGCGCAATGATTTG
EST: AAAACGGACTTGAAGGAACTCTATACAAAATATAAGGGCAACATGAACAG GCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTTEST: gi|211431464|gb|FL284143.1|FL284143
genomic: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAGgtgatttctt ... ttctatccagGCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTT
EST: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAG GCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTTEST: gi|32844155|gb|CD983836.1|CD983836
genomic: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAGgtgatttctt ... ttctatccagGCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTT
EST: AAAACGGACTTGAAGGAACTCTATACAAAATATAAGGGCAACATGAACAG GCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTTEST: gi|211342376|gb|FL103369.1|FL103369
genomic: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAGgtgatttctt ... ttctatccagGCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTT
EST: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAG GCTTT-CTGCGCAATGEST: gi|211339995|gb|FL103365.1|FL103365
genomic: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAGgtgatttctt ... ttctatccagGCTTTTCTGCGCAATG
EST: AAAACGGACTTGAAGGAACTCTATACAAAATATAAGGGCCACATGAACAG GCTTTTCTGCGCAATGATTTGEST: gi|211339988|gb|FL103358.1|FL103358
genomic: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAGgtgatttctt ... ttctatccagGCTTTTCTGCGCAATGATTTG
EST: AAAACGGACTTGAAGGAACTCTATACAAAATATAAGGGCAACATGAACAG GCTTTTCTGCGCAATGATTTGCTCAGAAEST: gi|60341956|gb|DN208929.1|DN208929
genomic: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAGgtgatttctt ... ttctatccagGCTTTTCTGCGCAATGATTTGCTCAGAA
EST: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAG GCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTTEST: gi|78074190|gb|DV502624.1|DV502624
genomic: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAGgtgatttctt ... ttctatccagGCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTT
EST: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAG GCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTTEST: gi|148958293|gb|EC904513.2|EC904513
genomic: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAGgtgatttctt ... ttctatccagGCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTT
EST: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAG GCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTTEST: gi|32909541|gb|CF014353.1|CF014353
genomic: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAGgtgatttctt ... ttctatccagGCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTT
EST: AAAACGGACTTGAAGGAACTCTATACAAAATATAAGGGCAACATGAACAG GCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTTEST: gi|148958294|gb|EC904514.2|EC904514
genomic: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAGgtgatttctt ... ttctatccagGCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTT
EST: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAG GCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTTEST: gi|78117499|gb|DV535886.1|DV535886
genomic: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAGgtgatttctt ... ttctatccagGCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTT
EST: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAG GCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTTEST: gi|32945462|gb|CF050281.1|CF050281
genomic: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAGgtgatttctt ... ttctatccagGCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTT
EST: AAAACGGACTTGAAGGACCTCTATACAAAATATAAGGGCAACATGAACAG GCTTTTCTGCGCAATGATTAGCTCAGAACCAAAGCTTGATTCTCACCGCTTEST: gi|32844895|gb|CD984576.1|CD984576
genomic: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAGgtgatttctt ... ttctatccagGCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTT
EST: AAAACGGACTTGAAGGAACTCTATACAAAATATAAGGGCAACATGAACAG GCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTTEST: gi|211339992|gb|FL103362.1|FL103362
genomic: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAGgtgatttctt ... ttctatccagGCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTT
EST: AAAACGGACTTGAAGGAACTCTATACAAAATATAAGGGCAACATGAACAG GCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACEST: gi|60351082|gb|DN218055.1|DN218055
genomic: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAGgtgatttctt ... ttctatccagGCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCAC
EST: AGGGCAACATGAACAG GCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTTEST: gi|71772229|gb|DR970166.1|DR970166
genomic: AGGGCAACATGAACAGgtgatttctt ... ttctatccagGCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTT
EST: AAAACGGACTTGAAGGAACTTTACACAAAATATAAGGGCAACATGAACAG GCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTTEST: gi|71435377|gb|DR816427.1|DR816427
genomic: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAGgtgatttctt ... ttctatccagGCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTT
EST: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAG GCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTT
genomic: AAAACGGACTTGAAGGAACTCTACACAAAATATAAGGGCAACATGAACAGgtgatttctt ... ttctatccagGCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTT
ctggtccaacaggcttgttttaatttctatattggcattgttcccttctatccagGCTTTTCTGCGCAATGATTTGCTCAGAACCAAAGCTTGATTCTCACCGCTTCAAGGATATAATTGACGAGGCGATTGGTGAAG
ttttaat putative branch site (score: 76)
ttgttcccttctatcc putative PPT
ttgttttaatttctat TA-rich tract