1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtaaatctccacgcactctgagttcaaacagtgttgtcagatccctgtctgatcttttacctttttattattctcaccagGAATCTTTGAAAAATGTACTGTTAATCTTTGCCAAGCTGAATGCTGGAATAAGATATGTACAAGGGATGAATGAAGTTTTGGCACCCCTCTTCTTTGTAT
species | Zea mays |
transcript | GRMZM2G068392_T03 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: CTGACATGCAGTTCTTCTGCGGCGACTCGTCTTTTGCAAAGTCCAATCAG GAATCTTTGAAAAATGTACTGTTAATCTTTGCCAAGCTGAATGCTGGAATAEST: gi|148935027|gb|EC879068.2|EC879068
genomic: CTGACATGCAGTTCTTCTGCGGCGACTCGTCTTTTGCAAAGTCCAATCAGgtaaatctcc ... ttctcaccagGAATCTTTGAAAAATGTACTGTTAATCTTTGCCAAGCTGAATGCTGGAATA
EST: CTGACATGCAGTTCTTCTGCGGCGACTCGTCTTTTGCAAAGTCCAATCAG GAATCTTTGAAAAATGTACTGTTAATCTTTGCCAAGCTGAATGCTGGAATAEST: gi|113817914|gb|DW939072.1|DW939072
genomic: CTGACATGCAGTTCTTCTGCGGCGACTCGTCTTTTGCAAAGTCCAATCAGgtaaatctcc ... ttctcaccagGAATCTTTGAAAAATGTACTGTTAATCTTTGCCAAGCTGAATGCTGGAATA
EST: CTGACATGCAGTTCTTCTGCGGCGACTCGTCTTTTGCAAAGTCCAATCAG GAATCTTTGAAAAATGTACTGTTAATCTTTGCCAAGCTGAATGCEST: gi|50324142|gb|CO519268.1|CO519268
genomic: CTGACATGCAGTTCTTCTGCGGCGACTCGTCTTTTGCAAAGTCCAATCAGgtaaatctcc ... ttctcaccagGAATCTTTGAAAAATGTACTGTTAATCTTTGCCAAGCTGAATGC
EST: CTGACATGCAGTTCTTCTGCGGCGACTCGTCTTTTGCAAAGTCCAATCAG GAATCTTTGAAAAATGTACTGTTAATCTTTGCCAAGCTGAATGCTGGAATAEST: gi|50331565|gb|CO526691.1|CO526691
genomic: CTGACATGCAGTTCTTCTGCGGCGACTCGTCTTTTGCAAAGTCCAATCAGgtaaatctcc ... ttctcaccagGAATCTTTGAAAAATGTACTGTTAATCTTTGCCAAGCTGAATGCTGGAATA
EST: CTGACATGCAGTTCTTCTGCGGCGACTCGTCTTTTGCAAAGTCCAATCAG GAATCTTTGAAAAATGTACTGTTAATCTTTGCCAAGCTGAATGCTGGAATAEST: gi|44681890|gb|CK786938.1|CK786938
genomic: CTGACATGCAGTTCTTCTGCGGCGACTCGTCTTTTGCAAAGTCCAATCAGgtaaatctcc ... ttctcaccagGAATCTTTGAAAAATGTACTGTTAATCTTTGCCAAGCTGAATGCTGGAATA
EST: CTGACATGCAGTTCTTCTGCGGCGACTCGTCTTTTGCAAAGTCCAATCAG GAATCTTTGAAAAATGTACTGTTAATCTTCGTTGCCAAGCTGAAATGCTGGEST: gi|50331308|gb|CO526434.1|CO526434
genomic: CTGACATGCAGTTCTTCTGCGGCGACTCGTCTTTTGCAAAGTCCAATCAGgtaaatctcc ... ttctcaccagGAATCTTTGAAAAATGTACTGTTAATCTT--T-GCCAAGCTGAA-TGCTGG
EST: CTGACATGCAGTTCTTCTGCGGCGACTCGTCTTTTGCAAAGTCCAATCAG GAATCTTTGAAAAATGTACTGTTAATCTTTGCCAAGCTGAATGCTGGAATAEST: gi|71433967|gb|DR815017.1|DR815017
genomic: CTGACATGCAGTTCTTCTGCGGCGACTCGTCTTTTGCAAAGTCCAATCAGgtaaatctcc ... ttctcaccagGAATCTTTGAAAAATGTACTGTTAATCTTTGCCAAGCTGAATGCTGGAATA
EST: CTGACATGCAGTTCTTCTGCGGCGACTCGTCTTTTGCAAAGTCCAATCAG GAATCTTTGAAAAATGTACTGTTAATCTTTGCCAAGCTGAATGCTGGAATA
genomic: CTGACATGCAGTTCTTCTGCGGCGACTCGTCTTTTGCAAAGTCCAATCAGgtaaatctcc ... ttctcaccagGAATCTTTGAAAAATGTACTGTTAATCTTTGCCAAGCTGAATGCTGGAATA
aaacagtgttgtcagatccctgtctgatcttttacctttttattattctcaccagGAATCTTTGAAAAATGTACTGTTAATCTTTGCCAAGCTGAATGCTGGAATAAGATATGTACAAGGGATGAATGAAGTTTTGGCACCCCTCTTCTTTGTAT
gtctgat putative branch site (score: 4)
tcttttacctttttat CT-rich tract
atcttttaccttttta TA-rich tract