1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtaactggcttattttctcttaacaattttttttggccttgccgtgagccctacattttccgattcaatcaacctagctgacttagctcattgtgttgtagGTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGACTTGTTAGCTGTAGTTGAATGAATTTTACCATGAAAATTTCGGACTTACC
species | Zea mays |
transcript | GRMZM2G050961_T02 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: GTTCTCTTCTCAGACATCAATGCTTATGAG GTGGAGCTTGGTACTGATGAAGAGAAGCACTACATCTGCCGTGAGTCAGACEST: gi|148943634|gb|EC888698.2|EC888698
genomic: GTTCTCTTCTCAGACATCAATGCTTATGAGgtaactggct ... tgtgttgtagGTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGAC
EST: GTTCTCTTCTCAGACATCAATGCTTATGAG GTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGACEST: gi|15198996|gb|BI423600.1|BI423600
genomic: GTTCTCTTCTCAGACATCAATGCTTATGAGgtaactggct ... tgtgttgtagGTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGAC
EST: GTTCTCTTCTCAGACATCAATGCTTATGAG GTGGAGCTTGGTACCGATGATGAGAAGCACTGCTTCTGCCGTGAGTCAGACEST: gi|148943633|gb|EC888697.2|EC888697
genomic: GTTCTCTTCTCAGACATCAATGCTTATGAGgtaactggct ... tgtgttgtagGTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGAC
EST: GTTCTCTTCTCAGACATCAATGCTTATGAG GTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGACEST: gi|113796158|gb|DW913371.1|DW913371
genomic: GTTCTCTTCTCAGACATCAATGCTTATGAGgtaactggct ... tgtgttgtagGTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGAC
EST: AGACATCAATGCTTATGAG GTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGACEST: gi|166466537|gb|EG225135.1|EG225135
genomic: AGACATCAATGCTTATGAGgtaactggct ... tgtgttgtagGTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGAC
EST: GTTCTCTTCTCAGACATCAATGCTTATGAG GTGGAGCTTGGEST: gi|29577011|gb|CB617123.1|CB617123
genomic: GTTCTCTTCTCAGACATCAATGCTTATGAGgtaactggct ... tgtgttgtagGTGGAGCTTGG
EST: GTTCTCTTCTCAGACATCAATGCTTATGAG GTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGACEST: gi|211061029|gb|FL204116.1|FL204116
genomic: GTTCTCTTCTCAGACATCAATGCTTATGAGgtaactggct ... tgtgttgtagGTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGAC
EST: GTTCTCTTCTCAGACATCAATGCTTATGAG GTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAAACEST: gi|6342692|gb|AW165516.1|AW165516
genomic: GTTCTCTTCTCAGACATCAATGCTTATGAGgtaactggct ... tgtgttgtagGTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGAC
EST: GTTCTCTTCTCAG-CATCAATGCTTATGAG GTGGAGCTTGGTACTGATGACGAGAAGCACTGCTTCTGCCGTGAGTCAGNCEST: gi|29167933|gb|CB411193.1|CB411193
genomic: GTTCTCTTCTCAGACATCAATGCTTATGAGgtaactggct ... tgtgttgtagGTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGAC
EST: GTTCTCTTCTCAGACATCAATGCTTATGAG GTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGACEST: gi|15499585|gb|BI596098.1|BI596098
genomic: GTTCTCTTCTCAGACATCAATGCTTATGAGgtaactggct ... tgtgttgtagGTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGAC
EST: GATCTCTTCTCAGACATCAATGCTTATGAG GTGGAGCTTGGTACEST: gi|13382241|gb|BG458916.1|BG458916
genomic: GTTCTCTTCTCAGACATCAATGCTTATGAGgtaactggct ... tgtgttgtagGTGGAGCTTGGTAC
EST: GTTCTCTTCTCAGACATCAATGCTTATGAG GTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGACEST: gi|113799136|gb|DW919645.1|DW919645
genomic: GTTCTCTTCTCAGACATCAATGCTTATGAGgtaactggct ... tgtgttgtagGTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGAC
EST: CTCAGACATCAATGCTTATGAG GTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGACEST: gi|29947167|gb|CB816515.1|CB816515
genomic: CTCAGACATCAATGCTTATGAGgtaactggct ... tgtgttgtagGTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGAC
EST: GTTCTCTTCTCAGACATCAATGCTTATGAG GTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGACEST: gi|211058063|gb|FL204109.1|FL204109
genomic: GTTCTCTTCTCAGACATCAATGCTTATGAGgtaactggct ... tgtgttgtagGTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGAC
EST: GTTCTCTTCTCAGACATCAATGCTTATGAG GTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGACEST: gi|32849976|gb|CD989657.1|CD989657
genomic: GTTCTCTTCTCAGACATCAATGCTTATGAGgtaactggct ... tgtgttgtagGTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGAC
EST: GTTCTCTTCTCAGACATCAATGCTTATGAG GTGGAGCTTGGTEST: gi|13558470|gb|BG549826.1|BG549826
genomic: GTTCTCTTCTCAGACATCAATGCTTATGAGgtaactggct ... tgtgttgtagGTGGAGCTTGGT
EST: GTTCTCTTCTCAGACATCAATGCTTATGAG GTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGACEST: gi|6431818|gb|AW172022.1|AW172022
genomic: GTTCTCTTCTCAGACATCAATGCTTATGAGgtaactggct ... tgtgttgtagGTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGAC
EST: GTTCTCTTCTCAGACATCAATGCTTATGAG GTGGAGCTTGG-ACTGATGACGAGAAGCACTGCTTCTGCCGTGAGTCAGACEST: gi|13237244|gb|BG355258.1|BG355258
genomic: GTTCTCTTCTCAGACATCAATGCTTATGAGgtaactggct ... tgtgttgtagGTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGAC
EST: GTTCTCTTCTCAGACATCAATGCTTATGAG GTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGACEST: gi|29544990|gb|CB605168.1|CB605168
genomic: GTTCTCTTCTCAGACATCAATGCTTATGAGgtaactggct ... tgtgttgtagGTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGAC
EST: GTTCTCTTCTCAGACATCAATGCTTATGAG GTGGAGCTTGGTACTGATGAAGAGAAGC-CTGCTTCTGCCGTGAGTCAGACEST: gi|26559456|gb|CA831691.1|CA831691
genomic: GTTCTCTTCTCAGACATCAATGCTTATGAGgtaactggct ... tgtgttgtagGTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGAC
EST: GTTCTCTTCTCAGACATCAATGCTTATGAG GTGGAGCTTGGTACTGATGACGAGAAGCACTGCTTCTGCCGTGAGTCAGAC
genomic: GTTCTCTTCTCAGACATCAATGCTTATGAGgtaactggct ... tgtgttgtagGTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGAC
agccctacattttccgattcaatcaacctagctgacttagctcattgtgttgtagGTGGAGCTTGGTACTGATGAAGAGAAGCACTGCTTCTGCCGTGAGTCAGACTTGTTAGCTGTAGTTGAATGAATTTTACCATGAAAATTTCGGACTTACC
agctgac putative branch site (score: 3)
tacatttt TA-rich tract