1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
...taaccttgatatattctggttgtatatcttttttttgaaaaacagaaagggcattatctggtcaactgatttgtttactttgcttttttatccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGGCTAGAGCACTTTTGGCTCAAGCTGAGAGACAGATTCCAGCATCAGTTG
species | Zea mays |
transcript | GRMZM2G037698_T02 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|149082488|gb|EE171681.2|EE171681
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|211398014|gb|FL052437.1|FL052437
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|211395393|gb|FL052425.1|FL052425
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAAGAA-GAGATGAGEST: gi|31350321|gb|CD434678.1|CD434678
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|211398013|gb|FL052436.1|FL052436
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|211124460|gb|FL005599.1|FL005599
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|211504415|gb|FL052464.1|FL052464
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTATTATAGCCAGGTTGAAGAAGGAAAGAGATGAAEST: gi|211390140|gb|FL052400.1|FL052400
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGA-
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCGTGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|211395402|gb|FL052434.1|FL052434
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|211398015|gb|FL052438.1|FL052438
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|211392766|gb|FL052411.1|FL052411
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|148956938|gb|EC902874.2|EC902874
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|148987120|gb|EE030948.2|EE030948
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|60397274|gb|DN230090.1|DN230090
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|211504427|gb|FL052476.1|FL052476
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|211395398|gb|FL052430.1|FL052430
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|211504417|gb|FL052466.1|FL052466
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|211502064|gb|FL052452.1|FL052452
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGGAAGAGATGAGEST: gi|211398012|gb|FL052435.1|FL052435
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTEST: gi|211392768|gb|FL052413.1|FL052413
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTT
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGGCGTGTTATAGCCNAGGT-GAAGAAGGAA-GAGATGAEST: gi|211125228|gb|FL005601.1|FL005601
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCC-AGGTTGAAGAAGGAAAGAGATGA
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|148940045|gb|EC884788.2|EC884788
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|211125241|gb|FL005614.1|FL005614
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|211502068|gb|FL052456.1|FL052456
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|211502063|gb|FL052451.1|FL052451
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTATTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|211506781|gb|FL052484.1|FL052484
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGGAAGAGATGAGEST: gi|211395391|gb|FL052423.1|FL052423
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|211392761|gb|FL052406.1|FL052406
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGEST: gi|211504424|gb|FL052473.1|FL052473
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTATTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|211395395|gb|FL052427.1|FL052427
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAANGAAAGAGATGANEST: gi|211392774|gb|FL052419.1|FL052419
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|211398022|gb|FL052445.1|FL052445
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|211502073|gb|FL052461.1|FL052461
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGGCTGCCGTGTTATAGCCAGGTTGAAAAAG-AAAGAGEST: gi|26456415|gb|CA827998.1|CA827998
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGCTATAGCCAGGCTGAAGAAGGAAAGAGATGAGEST: gi|211502067|gb|FL052455.1|FL052455
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: GCAGCAGCTACACACAGCAAGAACA-GAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGCTGAAGACG-AAAGAGATGAEST: gi|211506778|gb|FL052481.1|FL052481
genomic: GCAGCAGCTACACACAGCAAGA-CAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGA
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTATTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|31354887|gb|CD439244.1|CD439244
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|211125235|gb|FL005608.1|FL005608
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|149095787|gb|EE181433.2|EE181433
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|148958621|gb|EC904872.2|EC904872
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGEST: gi|211502065|gb|FL052453.1|FL052453
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTEST: gi|211504418|gb|FL052467.1|FL052467
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCT
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTNGCCTGGCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAEST: gi|211398020|gb|FL052443.1|FL052443
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCT-GCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGA
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACNGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAEST: gi|211392773|gb|FL052418.1|FL052418
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGAC-GCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGA
EST: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAG CATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
genomic: AGCAGCAGCTACACACAGCAAGACAAGAACTTAGTCATGCACTCTACCAGgtcttacatt ... tccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAG
aaagggcattatctggtcaactgatttgtttactttgcttttttatccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGGCTAGAGCACTTTTGGCTCAAGCTGAGAGACAGATTCCAGCATCAGTTG
aactgat putative branch site (score: 144)
tttgtttactttgctt CT-rich tract
ttttttat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| taaccttgatatattctggttgtatatcttttttttgaaaaacagaaagggcattatctggtcaactgatttgtttactttgcttttttatccctttcagCATGACGCTGCCTGCCGTGTTATAGCCAGGTTGAAGAAGGAAAGAGATGAGGCTAGAGCACTTTTGGCTCAAGCTGAGAGACAGATTCCAGCATCAGTTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - -ctggttg
- - - - - - - - - - - - - - - - - - -aaaaaca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - actgatt