1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtaagatgtttcagccggacctttgttctgccctggaatatctgatcttgtattgttaatcacctttatttctctatctgttttctgatcaattattttaattgccagCCTCTCCAAGAAGAGCGTTTTCACGCCCTATAAAAACTAACCTGAGGGTTGCCGAGTCGTCTGCATTTCTAGCATATGTCAAGCCAAGCACCCCAGCCAC
species | Zea mays |
transcript | GRMZM2G020081_T01 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: AGAAAAGATGGAGGGTGTTCCAGGCTCTGCCCTAGATGCCAGTAAAAAAT CCTCTCCAAGAAGAGCGTTTTCACGCCCTATAAAAACTAACCTGAGGGTTGEST: gi|32839850|gb|CD979531.1|CD979531
genomic: AGAAAAGATGGAGGGTGTTCCAGGCTCTGCCCTAGATGCCAGTAAAAAATgtaagatgtt ... taattgccagCCTCTCCAAGAAGAGCGTTTTCACGCCCTATAAAAACTAACCTGAGGGTTG
EST: AGAAAAGATGGAGGGTGTTCCAGGCTCTGCCCTAGATGCCAGTAAAAAAT CCTCTCCAAGAAGAGCGTTTTCACGCCCTATAAAAACTAACCTGAGGGTTG
genomic: AGAAAAGATGGAGGGTGTTCCAGGCTCTGCCCTAGATGCCAGTAAAAAATgtaagatgtt ... taattgccagCCTCTCCAAGAAGAGCGTTTTCACGCCCTATAAAAACTAACCTGAGGGTTG
tgttaatcacctttatttctctatctgttttctgatcaattattttaattgccagCCTCTCCAAGAAGAGCGTTTTCACGCCCTATAAAAACTAACCTGAGGGTTGCCGAGTCGTCTGCATTTCTAGCATATGTCAAGCCAAGCACCCCAGCCAC
ttttaat putative branch site (score: 3)
ttatttt CT-rich tract
ttttctgatcaattat TA-rich tract