1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtaaccccaaatctaaccttctattcttctgttatgctcctagtcctagatatgttcaggttttcaataataattaggacactaaggaacctgccatctattctcacattaagctattcaaaaatgaaataattttgttctcattcactgcagTTAGAAGGAGAAGCAACTGCACGGGCAATCCGTTTAGCTAAGTTCATCAATACGCCACTGTATGTTGTTCATGTGATGAGCATCGACGCAATGGATGAGA
species | Zea mays |
transcript | GRMZM2G020002_T03 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: ACCTTGGGATAACTGGTCCAGAAGGGCATGCTCTCTCAAGGCCTCCAATT TTAGAAGGAGAAGCAACTGCACGGGCAATCCGTTTAGCTAAGEST: gi|18659090|gb|BM500149.1|BM500149
genomic: ACCTTGGGATAACTGGTCCAGAAGGGCATGCTCTCTCAAGGCCTCCAATTgtaaccccaa ... ttcactgcagTTAGAAGGAGAAGCAACTGCACGGGCAATCCGTTTAGCTAAG
EST: ACCTTGGGATAACTGGTCCAGAAGGGCATGCTCTCTCAAGGCCTCCAATT TTAGAAGGAGAAGCAACTGCACGGGCAATCCGTTTAGCTAAGTTCATCAATEST: gi|31355355|gb|CD439712.1|CD439712
genomic: ACCTTGGGATAACTGGTCCAGAAGGGCATGCTCTCTCAAGGCCTCCAATTgtaaccccaa ... ttcactgcagTTAGAAGGAGAAGCAACTGCACGGGCAATCCGTTTAGCTAAGTTCATCAAT
EST: ACCTTGGGATAACTGGTCCAGAAGGGCATGCTCTCTCAAGGCCTCCAATT TTAGAAGGAGAAGCAACTGCACGGGCAATCCGTTTGGCGAAGTTCATCAAT
genomic: ACCTTGGGATAACTGGTCCAGAAGGGCATGCTCTCTCAAGGCCTCCAATTgtaaccccaa ... ttcactgcagTTAGAAGGAGAAGCAACTGCACGGGCAATCCGTTTAGCTAAGTTCATCAAT
tattctcacattaagctattcaaaaatgaaataattttgttctcattcactgcagTTAGAAGGAGAAGCAACTGCACGGGCAATCCGTTTAGCTAAGTTCATCAATACGCCACTGTATGTTGTTCATGTGATGAGCATCGACGCAATGGATGAGA
ttctcac putative branch site (score: 2)
ttttgttctcattc putative PPT
attaagctattcaaaa TA-rich tract