1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
...gttcatgtgaacatttagtgccttgctttgaagttaccaagttttttgaccctatacgaaaaatcaggctgaatggatcaaatggctgtttgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGCTATTGGAACTGGCAAAGTCGCCACCCCAGCTCAGGCTCAGGAA
species | Zea mays |
transcript | GRMZM2G018177_T01 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|22819721|gb|BU499811.1|BU499811
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCEST: gi|17931741|gb|BM268701.1|BM268701
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTC
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|101401985|gb|EB822612.1|EB822612
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|211242056|gb|FL120941.1|FL120941
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|91056160|gb|EB166578.1|EB166578
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|13237189|gb|BG355203.1|BG355203
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACEST: gi|5555350|gb|AI881301.1|AI881301
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAAC
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|18162555|gb|BM332394.1|BM332394
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|32858447|gb|CD998128.1|CD998128
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|211242069|gb|FL120954.1|FL120954
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|22473439|gb|BU037919.1|BU037919
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|24766239|gb|CA401394.1|CA401394
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCACCCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|33467983|gb|CF245032.1|CF245032
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: ACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|18168315|gb|BM338155.1|BM338155
genomic: ACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|32935495|gb|CF040307.1|CF040307
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|14202826|gb|BG836503.1|BG836503
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG ARAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATKAACCAGTCTGGGEST: gi|211531697|gb|FL104787.1|FL104787
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAAGATCAAGGACTGGAGCAAACGTTGTTCTTGEST: gi|21626066|gb|BQ620987.1|BQ620987
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAA-GATCAAGGACTGGAGCAA-CGTTGTTCTTG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|30087627|gb|CB885833.1|CB885833
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|60352667|gb|DN219640.1|DN219640
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|33094781|gb|CF054775.1|CF054775
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|16925608|gb|BM078676.1|BM078676
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|211239829|gb|FL120936.1|FL120936
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|14208462|gb|BG842140.1|BG842140
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|18161941|gb|BM331780.1|BM331780
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: ATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|32936738|gb|CF041557.1|CF041557
genomic: ATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACEST: gi|18165365|gb|BM335204.1|BM335204
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAAC
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|31358571|gb|CD442928.1|CD442928
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGGTGTTGCTGCACAAACAAGAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTEST: gi|24765545|gb|CA400704.1|CA400704
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTT
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|33467888|gb|CF244937.1|CF244937
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|32907755|gb|CF012568.1|CF012568
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGEST: gi|76012320|gb|DT939490.1|DT939490
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|32933794|gb|CF038606.1|CF038606
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACEST: gi|18173240|gb|BM348628.1|BM348628
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAAC
EST: CACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|32936242|gb|CF041054.1|CF041054
genomic: CACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTT-AACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACEST: gi|5069936|gb|AI737901.1|AI737901
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAAC
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|31358045|gb|CD442402.1|CD442402
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTGGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|213175742|gb|FM182722.1|FM182722
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|32919662|gb|CF024474.1|CF024474
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|89764158|gb|DY691067.1|DY691067
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|18165667|gb|BM335506.1|BM335506
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|76013519|gb|DT940689.1|DT940689
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|67020562|gb|CO449311.1|CO449311
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|13198676|gb|BG354478.1|BG354478
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGCTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGEST: gi|18172926|gb|BM348314.1|BM348314
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|31405699|gb|CD484431.1|CD484431
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|32908101|gb|CF012914.1|CF012914
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|32935178|gb|CF039990.1|CF039990
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGGTGCTGCACAAACAAAGGCAATTGCTG AGAAGATCGAGGACTGGAGCAACGTTEST: gi|91874218|gb|EB404175.1|EB404175
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTT
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|7227504|gb|AW566145.1|AW566145
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|22473030|gb|BU037525.1|BU037525
genomic: GCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACEST: gi|61118536|gb|DN559497.1|DN559497
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAAC
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|28982480|gb|BQ538137.2|BQ538137
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: TGGATGTTGTTGCTGCACAAACAAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|22819873|gb|BU499963.1|BU499963
genomic: TGGATGTTGTTGCTGCACAAAC-AAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|9733498|gb|BE512130.1|BE512130
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|60341170|gb|DN208143.1|DN208143
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|60397817|gb|DN230633.1|DN230633
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|211534317|gb|FL091476.1|FL091476
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|211522699|gb|FL104754.1|FL104754
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|18174112|gb|BM349500.1|BM349500
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|28909959|gb|CB331185.1|CB331185
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|22545650|gb|BU098009.1|BU098009
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|13382324|gb|BG458999.1|BG458999
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGCTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAEST: gi|211242058|gb|FL120943.1|FL120943
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCA
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|32907906|gb|CF012719.1|CF012719
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|211002461|gb|FL361134.1|FL361134
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|7227578|gb|AW566219.1|AW566219
genomic: GCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGNTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTEST: gi|78024857|gb|DV493244.1|DV493244
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACT
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|213182441|gb|FM190387.1|FM190387
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|17929542|gb|BM266502.1|BM266502
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|50335056|gb|CO530182.1|CO530182
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|18169243|gb|BM339083.1|BM339083
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTA AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|86468468|gb|DY234838.1|DY234838
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|18172280|gb|BM347668.1|BM347668
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|18175195|gb|BM350583.1|BM350583
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|18169675|gb|BM339515.1|BM339515
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|76013518|gb|DT940688.1|DT940688
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGEST: gi|15499671|gb|BI596184.1|BI596184
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGG
EST: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTG AGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCA
genomic: GGCTGGTTCAACCATGGATGTTGTTGCTGCACAAACAAAAGCAATTGCTGgtacttttcc ... tgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCA
ttgaccctatacgaaaaatcaggctgaatggatcaaatggctgtttgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGCTATTGGAACTGGCAAAGTCGCCACCCCAGCTCAGGCTCAGGAA
ttttgac putative branch site (score: 3)
tttgtttt putative PPT
tttgtttta TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gttcatgtgaacatttagtgccttgctttgaagttaccaagttttttgaccctatacgaaaaatcaggctgaatggatcaaatggctgtttgttttacagAGAAGATCAAGGACTGGAGCAACGTTGTTCTTGCCTATGAACCAGTCTGGGCTATTGGAACTGGCAAAGTCGCCACCCCAGCTCAGGCTCAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA