1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtaaaattatattttgtccttttcaaattattggacttttccccgtttcatgctgatgacctatatccaacttaccatcagaatttatgacacagATCTTTGTTCCAGTGCATAGAAATGCACATTGGTGTTTGGCACTAATAAACATGAAGGATAAAACATTGCAGTATCTTGAATCTCTTGTTGGTTGGGGCC
species | Zea mays |
transcript | GRMZM2G010505_T01 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: GATGGACAACATTCAAGAGGCTGGGTTATGGACTTGTCGAGTGTGAGAAA ATCTTTGTTCCAGTGCATAGAAATGCACATTGGTGTTTGGCACTAATAAACEST: gi|87153043|gb|DY397832.1|DY397832
genomic: GATGGACAACATTCAAGAGGCTGGGTTATGGACTTGTCGAGTGTGAGAAAgtaaaattat ... tatgacacagATCTTTGTTCCAGTGCATAGAAATGCACATTGGTGTTTGGCACTAATAAAC
EST: GGACAACATTCAAGAGGCTGGGTTATGGACTTGTCGAGTGTGAGAAA ATCTTTGTTCCAGTGCATAGAAATGCACATTGGTGTTTGGCACTAATAAACEST: gi|19436418|gb|BM952828.1|BM952828
genomic: GGACAACATTCAAGAGGCTGGGTTATGGACTTGTCGAGTGTGAGAAAgtaaaattat ... tatgacacagATCTTTGTTCCAGTGCATAGAAATGCACATTGGTGTTTGGCACTAATAAAC
EST: GATGGACAACATTCAAGAGGCTGGGTTATGGACTTGTCGAGTGTGAGAAA ATCTTTGTTCCAGTGCATAGAAATGCACATTGGTGTTTGGCACTAATAAAC
genomic: GATGGACAACATTCAAGAGGCTGGGTTATGGACTTGTCGAGTGTGAGAAAgtaaaattat ... tatgacacagATCTTTGTTCCAGTGCATAGAAATGCACATTGGTGTTTGGCACTAATAAAC
ccccgtttcatgctgatgacctatatccaacttaccatcagaatttatgacacagATCTTTGTTCCAGTGCATAGAAATGCACATTGGTGTTTGGCACTAATAAACATGAAGGATAAAACATTGCAGTATCTTGAATCTCTTGTTGGTTGGGGCC
aacttac putative branch site (score: 72)
agaatttat TA-rich tract