1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...ttgccttcgctcctcttgattcaagagatggtgcattcaaatgattttgtactgttgaaatcttttaccccatcgtgacgttcgtagctttttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG
species | Zea mays |
transcript | GRMZM2G495626_T03 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACEST: gi|22935988|gb|BU572263.1|BU572263
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: AACACATTACTCAACTGGCGTTGATATG-GGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGG-GACTCGGAGTTGCAACEST: gi|50328765|gb|CO523891.1|CO523891
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACEST: gi|71450236|gb|DR831286.1|DR831286
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACEST: gi|71771339|gb|DR969276.1|DR969276
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGEST: gi|91055879|gb|EB166297.1|EB166297
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTG
EST: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACEST: gi|87157025|gb|DY401814.1|DY401814
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGGCCGACGGCAGGCTCTCTTEST: gi|213167909|gb|FM191321.1|FM191321
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTT
EST: CACATTACTNNACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACEST: gi|71313275|gb|DR793171.1|DR793171
genomic: CACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACEST: gi|60343112|gb|DN210085.1|DN210085
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACEST: gi|71450237|gb|DR831287.1|DR831287
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: AACACATTACTCTACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACEST: gi|91872387|gb|EB402344.1|EB402344
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCCTTCCTGGTGACTCGGAGTT-CAACEST: gi|211301653|gb|FL434049.1|FL434049
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: GATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACEST: gi|74238746|gb|DT646660.1|DT646660
genomic: GATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: CAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACEST: gi|110195341|gb|EC877238.1|EC877238
genomic: CAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACEST: gi|30306650|gb|CD001323.1|CD001323
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACEST: gi|76294289|gb|DV033857.1|DV033857
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACEST: gi|71431608|gb|DR812658.1|DR812658
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACEST: gi|50336412|gb|CO531538.1|CO531538
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: ACACATTACTCAACTGGCGTTGATATGTGGTTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACEST: gi|91878647|gb|EB408604.1|EB408604
genomic: ACACATTACTCAACTGGCGTTGATATGTGG-TCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCGGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACEST: gi|149110995|gb|EE294494.2|EE294494
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACEST: gi|5005601|gb|AI711663.1|AI711663
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: AACACATTGCTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACEST: gi|211362664|gb|FL128442.1|FL128442
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACEST: gi|91873993|gb|EB403950.1|EB403950
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACEST: gi|76908586|gb|DV163013.1|DV163013
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACEST: gi|76289583|gb|DV029151.1|DV029151
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACEST: gi|71313277|gb|DR793172.1|DR793172
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACEST: gi|71431609|gb|DR812659.1|DR812659
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
EST: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTEST: gi|87155782|gb|DY400571.1|DY400571
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTT
EST: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTG CTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
genomic: AACACATTACTCAACTGGCGTTGATATGTGGTCTGTTGGATGCATCTTTGgtaagtctgt ... tttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAAC
tttgtactgttgaaatcttttaccccatcgtgacgttcgtagctttttaatgcagCTGAAATGGCCCGACGGCAGGCTCTCTTTCCTGGTGACTCGGAGTTGCAACAGTTGCTTCACATCTTCAG
ttttaat putative branch site (score: 13)
cttttt CT-rich tract
aaatctttta TA-rich tract