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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ggagcaacggtaccagtacgcgtcaaggttgacaaagctatctgggaccactttgtaattgccaactcttcattgattatttttatatatgttgctccagAATAAATG

Basic information

species Zea mays
transcript GRMZM2G410191_T01
intron # 4
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gaccactttgtaattgccaactcttcattgattatttttatatatgttgctccagAATAAATG
                         cattgat  putative branch site (score: 4)
                                              ttgctcc  putative PPT
                  aactcttcattgatta  TA-rich tract