1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtaataaaatgtcacccatgctcatgatcttttaagtatatttaggtactgttcagtaggatggggtaaatattttctacctttcaaaagagaccaataaatctttttaacatttcagttttttcataaataaaaaaggaaagatttgacaaatgactttattatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCGCCATTGTTGGTGGATCCAAGGTCTCAACTAAGATTGGTGTCATTGAGT
species | Zea mays |
transcript | GRMZM2G382914_T04 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|67017421|gb|CO446170.1|CO446170
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|148934221|gb|EC878242.2|EC878242
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTATCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|18655174|gb|BM499979.1|BM499979
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|67031860|gb|CO460609.1|CO460609
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|67015745|gb|CO444494.1|CO444494
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|148947626|gb|EC893106.2|EC893106
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATGTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAEST: gi|18655175|gb|BM499980.1|BM499980
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAA
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCT-GTTGGAGCTGTTGCCA-CCCAAAGAAGCCATTTGCCEST: gi|21390017|gb|BQ528066.1|BQ528066
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|21987634|gb|BQ779162.1|BQ779162
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|149089819|gb|EE179096.2|EE179096
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|148961193|gb|EE011908.2|EE011908
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|211204153|gb|FL151901.1|FL151901
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|18655173|gb|BM499978.1|BM499978
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|149089095|gb|EE178268.2|EE178268
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|211463797|gb|FL050216.1|FL050216
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAN GAACTTGACTACCTTGTTGGAGEST: gi|149096538|gb|EE182286.2|EE182286
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAG
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|67012385|gb|CO441134.1|CO441134
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGA-GCCATTTGCCEST: gi|67014158|gb|CO442907.1|CO442907
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|211376661|gb|FL050170.1|FL050170
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCCGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|21843195|gb|BQ703776.1|BQ703776
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: CTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|60396216|gb|DN229085.1|DN229085
genomic: CTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|78109940|gb|DV528355.1|DV528355
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|211466338|gb|FL050238.1|FL050238
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTEST: gi|31349922|gb|CD434279.1|CD434279
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTT
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|26457504|gb|CA829087.1|CA829087
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|211471398|gb|FL050271.1|FL050271
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|22936004|gb|BU572279.1|BU572279
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: ACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|109179056|gb|EC379786.1|EC379786
genomic: ACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: AGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAAG GAACTTGACTACCTTGTTGEST: gi|78026883|gb|DV495270.1|DV495270
genomic: AGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAA-Ggtaataaaat ... attatctcagGAACTTGACTACCTTGTTG
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|67031113|gb|CO459862.1|CO459862
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCANAGAAGCCATTTGCCEST: gi|22715290|gb|BU197684.1|BU197684
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAEST: gi|60359146|gb|DN226119.1|DN226119
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGA
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|31356119|gb|CD440476.1|CD440476
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|31352972|gb|CD437329.1|CD437329
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|71762961|gb|DR960898.1|DR960898
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|32937163|gb|CF041982.1|CF041982
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|67032286|gb|CO461035.1|CO461035
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|31356342|gb|CD440699.1|CD440699
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|4730492|gb|AI649658.1|AI649658
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|213170620|gb|FM193204.1|FM193204
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGNNN NNACTTGACTACCTTGTTGGAGCTGTTNNNNNCCCAAAGAAGCCATTTGCCEST: gi|71316996|gb|DR795183.1|DR795183
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|21843572|gb|BQ704153.1|BQ704153
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|149111078|gb|EE294575.2|EE294575
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAA GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|213179338|gb|FM194686.1|FM194686
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|18662174|gb|BM501784.1|BM501784
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|148933205|gb|EC876853.2|EC876853
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|21760023|gb|BQ635564.1|BQ635564
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: TGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|31356173|gb|CD440530.1|CD440530
genomic: TGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|31355954|gb|CD440311.1|CD440311
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCEST: gi|31351413|gb|CD435770.1|CD435770
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
EST: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAG GAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
genomic: GAGTTACCAAGTATTTGAAGCCTGCTGTTGCTGGCTTCCTCATGCAGAAGgtaataaaat ... attatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCC
cagttttttcataaataaaaaaggaaagatttgacaaatgactttattatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCGCCATTGTTGGTGGATCCAAGGTCTCAACTAAGATTGGTGTCATTGAGT
atttgac putative branch site (score: 996)
ctttatt putative PPT
ttttcataaataaaaa TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaataaaatgtcacccatgctcatgatcttttaagtatatttaggtactgttcagtaggatggggtaaatattttctacctttcaaaagagaccaataaatctttttaacatttcagttttttcataaataaaaaaggaaagatttgacaaatgactttattatctcagGAACTTGACTACCTTGTTGGAGCTGTTGCCAACCCAAAGAAGCCATTTGCCGCCATTGTTGGTGGATCCAAGGTCTCAACTAAGATTGGTGTCATTGAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA