1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtaagacatttcatgtcatgataatttggtttaattatgttcaaactcattctgcatgaaaagatataaaacagtgatgtcttatgtgatttcatttctttaattactgatgctttgcattattttgtagGAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAG
species | Zea mays |
transcript | GRMZM2G344476_T01 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATG GAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAGEST: gi|148956464|gb|EC902291.2|EC902291
genomic: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATGgtaagacatt ... tattttgtagGAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAG
EST: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATG GAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAGEST: gi|74238643|gb|DT646557.1|DT646557
genomic: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATGgtaagacatt ... tattttgtagGAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAG
EST: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATG GAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAGEST: gi|211119071|gb|FL021982.1|FL021982
genomic: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATGgtaagacatt ... tattttgtagGAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAG
EST: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATG GAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAGEST: gi|149104205|gb|EE289638.2|EE289638
genomic: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATGgtaagacatt ... tattttgtagGAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAG
EST: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATG GAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAGEST: gi|148936448|gb|EC880552.2|EC880552
genomic: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATGgtaagacatt ... tattttgtagGAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAG
EST: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATG GAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAGEST: gi|149112589|gb|EE191373.2|EE191373
genomic: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATGgtaagacatt ... tattttgtagGAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAG
EST: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATG GAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAGEST: gi|91872284|gb|EB402241.1|EB402241
genomic: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATGgtaagacatt ... tattttgtagGAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAG
EST: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATG GAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAGEST: gi|50331303|gb|CO526429.1|CO526429
genomic: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATGgtaagacatt ... tattttgtagGAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAG
EST: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATG GAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAGEST: gi|148958992|gb|EE010517.2|EE010517
genomic: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATGgtaagacatt ... tattttgtagGAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAG
EST: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATG GAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAGEST: gi|148944150|gb|EC889238.2|EC889238
genomic: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATGgtaagacatt ... tattttgtagGAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAG
EST: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATG GAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAGEST: gi|4730512|gb|AI649678.1|AI649678
genomic: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATGgtaagacatt ... tattttgtagGAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAG
EST: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATG GAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAGEST: gi|71315960|gb|DR794668.1|DR794668
genomic: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATGgtaagacatt ... tattttgtagGAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAG
EST: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATG GAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAGEST: gi|91875931|gb|EB405888.1|EB405888
genomic: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATGgtaagacatt ... tattttgtagGAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAG
EST: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATG GAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAG
genomic: AGCAAATCGCCCAGACTATGTGTTAAATAAGTACGACTACTTTGGTTATGgtaagacatt ... tattttgtagGAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAG
gatgtcttatgtgatttcatttctttaattactgatgctttgcattattttgtagGAACTAATAGTTCTGTTCATCAAGTCAATGTTGTTGCACTATCAAAG
tactgat putative branch site (score: 63)
ttatttt putative PPT
atttcatttctttaat TA-rich tract